RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GRPRP30550 384 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 AGFG1P52594 562 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 NUP107P57740 925 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 H3F3AP84243 136 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 SRYQ05066 204 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 C3AR1Q16581 482 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 SGCBQ16585 318 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 ZNF239Q16600 458 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 ANKDD1AQ495B1 522 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 ZBED5Q49AG3 693 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PAQR6Q6TCH4 344 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 RASSF6Q6ZTQ3 369 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 OAFQ86UD1 273 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PM20D2Q8IYS1 436 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 GALNT4Q8N4A0 578 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 CLDN22Q8N7P3 220 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 OR13C2Q8NGS9 318 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 ASPNQ9BXN1 380 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 SRXN1Q9BYN0 137 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 VCX3BQ9H321 246 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PAPOLBQ9NRJ5 636 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 KRT84Q9NSB2 600 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PAQR5Q9NXK6 330 aaPredicted RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 MRPL39Q9NYK5 338 aaKnown RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 SIGLEC7Q9Y286 467 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 B3GALT5Q9Y2C3 310 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 IGSF10Q6WRI0 2623 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 TRAV27A0A087WT01 109 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 NPIPA2E9PIF3 369 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 NPIPA3F8WFD2 350 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 M0R082 166 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 PLPP3O14495 311 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
PDPN-210ENST00000513143 MITFO75030 526 aaPredicted RBP11.22□□□□□ -0.61
PDPN-210ENST00000513143 AKR7A3O95154 331 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 OSMP13725 252 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 GTF2E2P29084 291 aaKnown RBP11.22□□□□□ -0.61
PDPN-210ENST00000513143 UQCRC1P31930 480 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 PTGS2P35354 604 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 P2RY4P51582 365 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 PMS2P3Q13401 168 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ZNF620Q6ZNG0 422 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 H1FNTQ75WM6 255 aaPredicted RBP11.22□□□□□ -0.61
PDPN-210ENST00000513143 KIF18BQ86Y91 864 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 TMEM99Q8N816 258 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ADPRHL1Q8NDY3 354 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 OR5J2Q8NH18 312 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 OR51A7Q8NH64 312 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ZPLD1Q8TCW7 415 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ZHX1-C8orf76Q96EF9 292 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 TNFRSF13CQ96RJ3 184 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
PDPN-210ENST00000513143 VCXQ9H320 206 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 MCCC2Q9HCC0 563 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 CHST11Q9NPF2 352 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 IL20Q9NYY1 176 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 SEC14L4Q9UDX3 406 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 CAMK2AQ9UQM7 478 aa11.22□□□□□ -0.61
PDPN-210ENST00000513143 AQP7P3A6NL99 342 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ZNF814B7Z6K7 855 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 MS4A18H0YCH9 400 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 DLGAP1O14490 977 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 RCBTB2O95199 551 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 EDN3P14138 238 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ENPP1P22413 925 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 VHLP40337 213 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 RAD23AP54725 363 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 MLLT10P55197 1068 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 PRPS1P60891 318 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ESRRGP62508 458 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 IL1RL1Q01638 556 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ZP4Q12836 540 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 RFX4Q33E94 735 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 MS4A18Q3C1V0 323 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 GXYLT1Q4G148 440 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 RPL13AP3Q6NVV1 102 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 GFRALQ6UXV0 394 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 NANOGNBQ7Z5D8 188 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 GALNT5Q7Z7M9 940 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ADGRE4PQ86SQ3 457 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ZNF845Q96IR2 970 aaPredicted RBP11.21□□□□□ -0.61
PDPN-210ENST00000513143 RDH12Q96NR8 316 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms