RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PLCE1Q9P212 2302 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 ARPC4-TTLL3A0A0A6YYG9 625 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 A0A1W2PR80 420 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 TMEM72A0PK05 275 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 LIPT2A6NK58 231 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 A8MVM7 634 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 UBDO15205 165 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 KRT33AO76009 404 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 NR2F1P10589 423 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 SRD5A1P18405 259 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 POLR2JP52435 117 aaKnown RBP10.97□□□□□ -0.65
VEGFA-216ENST00000512683 FOXG1P55316 489 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-216ENST00000512683 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-216ENST00000512683 SPOCK1Q08629 439 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 EPS8Q12929 822 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 GTDC1Q4AE62 458 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 OTUD3Q5T2D3 398 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-216ENST00000512683 LIPNQ5VXI9 398 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 WBP2NLQ6ICG8 309 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 EPGNQ6UW88 154 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 CCDC36Q8IYA8 594 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 SLC35B4Q969S0 331 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 AURKBQ96GD4 344 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-216ENST00000512683 SLC38A2Q96QD8 506 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 ZNF232Q9UNY5 417 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 RASD1Q9Y272 281 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 USH1CQ9Y6N9 552 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 DSPPQ9NZW4 1301 aa10.97□□□□□ -0.65
VEGFA-216ENST00000512683 LOC100289279A0A1B0GTE1 492 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 CDHR4A6H8M9 788 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 ERCC1P07992 297 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-216ENST00000512683 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 ETFAP13804 333 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-216ENST00000512683 CCNA2P20248 432 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 UBE2NP61088 152 aaKnown RBP10.96□□□□□ -0.65
VEGFA-216ENST00000512683 CEACAM7Q14002 265 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.65
VEGFA-216ENST00000512683 ANKRD16Q6P6B7 361 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 MSANTD1Q6ZTZ1 278 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 TMEM99Q8N816 258 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 STK35Q8TDR2 534 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 NEU4Q8WWR8 484 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-216ENST00000512683 VPS33AQ96AX1 596 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 FBXO17Q96EF6 278 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 RAB1BQ9H0U4 201 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 TPT1P8Q9HAU6 139 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 CA10Q9NS85 328 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 RLIMQ9NVW2 624 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 MOKQ9UQ07 419 aa10.96□□□□□ -0.65
VEGFA-216ENST00000512683 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF587BE7ETH6 402 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 RPL36A-HNRNPH2H7BZ11 118 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 APEHP13798 732 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF23P17027 643 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 MRPL19P49406 292 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 PPOXP50336 477 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 SLC25A3Q00325 362 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 LARS2Q15031 903 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 OR7A5Q15622 319 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 C9orf135Q5VTT2 229 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 CREB3L2Q70SY1 520 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 VRK2Q86Y07 508 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 FUNDC1Q8IVP5 155 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 MIER2Q8N344 545 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 NUP37Q8NFH4 326 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 MFSD8Q8NHS3 518 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 GTF2H4Q92759 462 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 HPS1Q92902 700 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 MSI2Q96DH6 328 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 ITCHQ96J02 903 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 C7orf26Q96N11 449 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 FOXN4Q96NZ1 517 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 PLK3Q9H4B4 646 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 CACYBPQ9HB71 228 aaKnown RBP10.95□□□□□ -0.66
VEGFA-216ENST00000512683 IFT52Q9Y366 437 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 CHST2Q9Y4C5 530 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 PCDHB14Q9Y5E9 798 aa10.95□□□□□ -0.66
VEGFA-216ENST00000512683 IGHV1-18A0A0C4DH31 117 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 A0A0G2JPF8 293 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 LOC102725191A0A1B0GVB3 256 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ZC3H12DA2A288 527 aaKnown RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 HNRNPCL2B2RXH8 293 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 HNRNPCL3B7ZW38 293 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms