RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 SYNPRQ8TBG9 265 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SPACA7Q96KW9 195 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 Q96M85 177 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ZFYVE21Q9BQ24 234 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 MAB21L2Q9Y586 359 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 POM121CA8CG34 1229 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ZNF879B4DU55 563 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 CYR61O00622 381 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 KRT33AO76009 404 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SIX6O95475 246 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 CBX7O95931 251 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TMIGD3P0DMS9 266 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 POU3F2P20265 443 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 GDI1P31150 447 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PPP1CAP62136 330 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ACTA2P62736 377 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ACTG2P63267 376 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PSG6Q00889 435 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 HYAL4Q2M3T9 481 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 LINC00303Q3SY05 128 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 CDONQ4KMG0 1287 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TMEM69Q5SWH9 247 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OVCH1Q7RTY7 1134 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SGTBQ96EQ0 304 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 IGFLR1Q9H665 355 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PTTG3PQ9NZH4 202 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 BAIAP2Q9UQB8 552 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 A0A1W2PPL8 197 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SPI1P17947 270 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ZNF10P21506 573 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ADPRHP54922 357 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 UBE2MP61081 183 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 NHLRC1Q6VVB1 395 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OR52B4Q8NGK2 314 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OR9A4Q8NGU2 314 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 FLVCR1-AS1Q8TAF5 88 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 FCAMRQ8WWV6 532 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 STACQ99469 402 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 NKX3-1Q99801 234 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TRIM2Q9C040 744 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 MKKSQ9NPJ1 570 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 LRIT1Q9P2V4 623 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SERTAD3Q9UJW9 196 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 DTX4Q9Y2E6 619 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 FKBP7Q9Y680 259 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 V9GY05 133 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TMEM72A0PK05 275 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 KHNYNO15037 678 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 LGALS3BPQ08380 585 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ZNF542PQ5EBM4 170 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OR5M10Q6IEU7 315 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 RNF44Q7L0R7 432 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SYS1Q8N2H4 156 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 NPEPL1Q8NDH3 523 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OR4C3Q8NH37 302 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 MOSPD2Q8NHP6 518 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 C7orf50Q9BRJ6 194 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 CRISPLD2Q9H0B8 497 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 ZCCHC4Q9H5U6 513 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 OR5V1Q9UGF6 321 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TVP23AA6NH52 213 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 L7N2F9 121 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 M6PRP20645 277 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 FCARP24071 287 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 RAG2P55895 527 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 TFF2Q03403 129 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PLA2G7Q13093 441 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SFRP5Q5T4F7 317 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SPERTQ8NA61 448 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 RGP1Q92546 391 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 S100A16Q96FQ6 103 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 C1QTNF7Q9BXJ2 289 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 C14orf105Q9NVL8 296 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 SCML1Q9UN30 329 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 PCDHGA5Q9Y5G8 931 aa8.48□□□□□ -1.05
LIMCH1-215ENST00000512632 A0A087WV62 115 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 MAS1P04201 325 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 CDK2P24941 298 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 PTH2RP49190 550 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 KCNAB1Q14722 419 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 KIR2DS3Q14952 304 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 LEG1Q6P5S2 330 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 OR14A16Q8NHC5 309 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 TCF7L1Q9HCS4 588 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 HRASLS2Q9NWW9 162 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 ENTPD2Q9Y5L3 495 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 MEIS3P1A6NDR6 274 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 GABARAPH6UMI1 98 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 H7C1C5 153 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 GSTZ1O43708 216 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 GMFGO60234 142 aa8.47□□□□□ -1.05
LIMCH1-215ENST00000512632 KCNJ13O60928 360 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms