RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SURF4O15260 269 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SLC16A4O15374 487 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TGOLN2O43493 480 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 KIAA0513O60268 411 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SRPX2O60687 465 aaPredicted RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 FARS2O95363 451 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TSPAN13O95857 204 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 HLA-DQA2P01906 255 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 VTNP04004 478 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 CDK1P06493 297 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SMIM18P0DKX4 95 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 PRF1P14222 555 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 HOXB2P14652 356 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TBXA2RP21731 343 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 GJB2P29033 226 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 DDOSTP39656 456 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 RBM34P42696 430 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 NOVA1P51513 510 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TMEM50BP56557 158 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SRSF6Q13247 344 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 CTTNQ14247 550 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ZNF74Q16587 644 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 VPS26BQ4G0F5 336 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ACSM3Q53FZ2 586 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ARL13AQ5H913 290 aaPredicted RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SPIN3Q5JUX0 258 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TIMM23BQ5SRD1 257 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 AGAP7PQ5VUJ5 663 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 C22orf42Q6IC83 251 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TMPRSS11FQ6ZWK6 438 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SLC16A14Q7RTX9 510 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 NUFIP2Q7Z417 695 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 GOLGA7Q7Z5G4 137 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 CPEB2Q7Z5Q1 589 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ACOT1Q86TX2 421 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ITIH5Q86UX2 942 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 HPS6Q86YV9 775 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 LACC1Q8IV20 430 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ERI1Q8IV48 349 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 WDFY1Q8IWB7 410 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 RCOR2Q8IZ40 523 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 EID3Q8N140 333 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 TMEM251Q8N6I4 163 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 UBL4BQ8N7F7 174 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ATP6V0D2Q8N8Y2 350 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 GJC3Q8NFK1 279 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 OR1J2Q8NGS2 313 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 OR2Y1Q8NGV0 311 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 RNASEH2CQ8TDP1 164 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ISOC2Q96AB3 205 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 CREB3L1Q96BA8 519 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ANKRD9Q96BM1 317 aaPredicted RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 FBXL8Q96CD0 374 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 AGAP4Q96P64 663 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 LGMNQ99538 433 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 YTHDF1Q9BYJ9 559 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 LRRC2Q9BYS8 371 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 LAT2Q9GZY6 243 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 CSTL1Q9H114 145 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 MARCH7Q9H992 704 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 NMUR1Q9HB89 426 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 SPAG4Q9NPE6 437 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 IFT46Q9NQC8 304 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ECHDC1Q9NTX5 307 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ABHD10Q9NUJ1 306 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 NLE1Q9NVX2 485 aaPredicted RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 GIN1Q9NXP7 522 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 ZDHHC2Q9UIJ5 367 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 B3GALT5Q9Y2C3 310 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 MRPS28Q9Y2Q9 187 aaKnown RBP3.38□□□□□ -1.87
COL6A5-204ENST00000512482 A3GALT2U3KPV4 340 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 V9GYY9 64 aa3.38□□□□□ -1.87
COL6A5-204ENST00000512482 WNK3Q9BYP7 1800 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 AQRO60306 1485 aaKnown RBP eCLIP3.37□□□□□ -1.87
COL6A5-204ENST00000512482 ARHGEF10O15013 1369 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 MSH6P52701 1360 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
COL6A5-204ENST00000512482 LRP5LA4QPB2 252 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 PSMB11A5LHX3 300 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 CASTOR2A6NHX0 329 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 SHISA7A6NL88 538 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 RFPL4AA6NLU0 287 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 RFPL4AL1F8VTS6 287 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 NPIPA3F8WFD2 350 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 SULT1C2O00338 296 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 KPNA3O00505 521 aaPredicted RBP3.37□□□□□ -1.87
COL6A5-204ENST00000512482 TNFSF11O14788 317 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 ARPC1BO15143 372 aaKnown RBP3.37□□□□□ -1.87
COL6A5-204ENST00000512482 TCAPO15273 167 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 INPP4BO15327 924 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 SYT7O43581 403 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 CST8O60676 142 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 EIF1BO60739 113 aaKnown RBP3.37□□□□□ -1.87
COL6A5-204ENST00000512482 CLDN9O95484 217 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 P04436 131 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 SERPINB2P05120 415 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 HCKP08631 526 aa3.37□□□□□ -1.87
COL6A5-204ENST00000512482 ANXA3P12429 323 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms