RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 OR4F5Q8NH21 305 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 OTULINQ96BN8 352 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 SGTBQ96EQ0 304 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 WFIKKN1Q96NZ8 548 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 OR4F4Q96R69 305 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 HOPXQ9BPY8 73 aaPredicted RBP5.47□□□□□ -1.53
CHD1-208ENST00000512392 ACTR3CQ9C0K3 210 aaPredicted RBP5.47□□□□□ -1.53
CHD1-208ENST00000512392 PARVBQ9HBI1 364 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 ISYNA1Q9NPH2 558 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 AGPAT4Q9NRZ5 378 aa5.47□□□□□ -1.53
CHD1-208ENST00000512392 AK6Q9Y3D8 172 aaKnown RBP5.47□□□□□ -1.53
CHD1-208ENST00000512392 NKX6-3A6NJ46 265 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CDC14BO60729 498 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 KHDRBS3O75525 346 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 OXTP01178 125 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 TFPTP0C1Z6 253 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 MYOGP15173 224 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 MAGEA3P43357 314 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 RIDAP52758 137 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 PITX1P78337 314 aaPredicted RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 CX3CL1P78423 397 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CCL7P80098 99 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 MRPS22P82650 360 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 TLE4Q04727 773 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ZNF268Q14587 947 aaPredicted RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 PAPPA-AS1Q5QFB9 102 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 METTL21CQ5VZV1 264 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 GCNT7Q6ZNI0 430 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 GSPT2Q8IYD1 628 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 TMEM251Q8N6I4 163 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 OR2V1Q8NHB1 315 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ART4Q93070 314 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 FLYWCH2Q96CP2 140 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 NEDD4LQ96PU5 975 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 MCCC1Q96RQ3 725 aaPredicted RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 EPYCQ99645 322 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 EBNA1BP2Q99848 306 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 ALG8Q9BVK2 526 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 DEFB129Q9H1M3 183 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 SEC61A2Q9H9S3 476 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ACP6Q9NPH0 428 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 XPNPEP1Q9NQW7 623 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ALG6Q9Y672 507 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ABCB11O95342 1321 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ROCK2O75116 1388 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 A0A087X1B8 175 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 A0A1B0GVI7 797 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 KMOO15229 486 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 EIF4E2O60573 245 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 RNASEH1O60930 286 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 MPZL1O95297 269 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 NDUFA10O95299 355 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 FGF19O95750 216 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 HOXC6P09630 235 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 COMTP21964 271 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CA4P22748 312 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 TMEM33P57088 247 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ZP1P60852 638 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 AESQ08117 197 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 PHKG1Q16816 387 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CCNJQ5T5M9 372 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 SYPL2Q5VXT5 272 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 KCTD18Q6PI47 426 aaPredicted RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 NAPRTQ6XQN6 538 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ASRGL1Q7L266 308 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 SHFQ7M4L6 423 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 APOBEC3FQ8IUX4 373 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 NAXDQ8IW45 347 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 OR10J5Q8NHC4 309 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 GTF3AQ92664 365 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 UBE2E3Q969T4 207 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CCDC126Q96EE4 140 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 GAREM1Q9H706 876 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 CAB39LQ9H9S4 337 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 A4GALTQ9NPC4 353 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 PNRC2Q9NPJ4 139 aaKnown RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 TMEM74BQ9NUR3 256 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 EXD2Q9NVH0 621 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 PAK1IP1Q9NWT1 392 aaPredicted RBP5.46□□□□□ -1.54
CHD1-208ENST00000512392 GUCA1BQ9UMX6 200 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 LAMP3Q9UQV4 416 aa5.46□□□□□ -1.54
CHD1-208ENST00000512392 ARID1BQ8NFD5 2236 aaPredicted RBP5.45□□□□□ -1.54
CHD1-208ENST00000512392 DCAF1Q9Y4B6 1507 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 PSMB11A5LHX3 300 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 MYMKA6NI61 221 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 CCRL2O00421 344 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 DVL1O14640 695 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 LAMTOR5O43504 91 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 SRP72O76094 671 aaKnown RBP5.45□□□□□ -1.54
CHD1-208ENST00000512392 SYF2O95926 243 aaKnown RBP5.45□□□□□ -1.54
CHD1-208ENST00000512392 SERPINA1P01009 418 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 IGHG3P01860 377 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 MELTFP08582 738 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 C21orf33P30042 268 aaPredicted RBP5.45□□□□□ -1.54
CHD1-208ENST00000512392 MLLT10P55197 1068 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 PDIA2Q13087 525 aaKnown RBP5.45□□□□□ -1.54
CHD1-208ENST00000512392 PSG5Q15238 335 aa5.45□□□□□ -1.54
CHD1-208ENST00000512392 TIGD2Q4W5G0 525 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms