RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MAP2K6P52564 334 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 NR1H2P55055 460 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CDC42P60953 191 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 EFNB1P98172 346 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CDK5Q00535 292 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 SNTA1Q13424 505 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 MAD2L1BPQ15013 274 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 ZIK1Q3SY52 487 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 ANKDD1AQ495B1 522 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 WBP2NLQ6ICG8 309 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM154Q6P9G4 183 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC22A8Q8TCC7 542 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM239Q8WW34 195 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 HGDQ93099 445 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 SIGLEC11Q96RL6 698 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 GAL3ST4Q96RP7 486 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM43Q9BTV4 400 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 PRRG3Q9BZD7 231 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 FAM192AQ9GZU8 254 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 DEFB127Q9H1M4 99 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 RIBC2Q9H4K1 309 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CDCP1Q9H5V8 836 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 MED17Q9NVC6 651 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 BEX4Q9NWD9 120 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 FLRT3Q9NZU0 649 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 PCDHGB5Q9Y5G0 923 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPA5A0A0B4J1W7 369 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPA7E9PJI5 369 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 FRS3O43559 492 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 PRKNO60260 465 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NME2P1O60361 137 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ADAM11O75078 769 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 FZD7O75084 574 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ICOSLGO75144 302 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 REM1O75628 298 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 CLPTM1O96005 669 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 TFAP2AP05549 437 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPA8P0DM63 369 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NME2P22392 152 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 EPHA2P29317 976 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 TTKP33981 857 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 EVI2BP34910 448 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC9A3P48764 834 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 COPZ1P61923 177 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 PTGES3Q15185 160 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 POU4F3Q15319 338 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 CD226Q15762 336 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NTRK2Q16620 822 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 GXYLT1Q4G148 440 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF585AQ6P3V2 769 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 C5orf46Q6UWT4 87 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 APOOLQ6UXV4 268 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF730Q6ZMV8 503 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF620Q6ZNG0 422 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 RRM2BQ7LG56 351 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 GALNT5Q7Z7M9 940 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 NKAIN4Q8IVV8 208 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 TSPAN14Q8NG11 270 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 OR8J1Q8NGP2 316 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 IPCEF1Q8WWN9 437 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 OSTF1Q92882 214 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 EFHD2Q96C19 240 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 TMCO6Q96DC7 493 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ADOQ96SZ5 270 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 TTYH2Q9BSA4 534 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 ADAM19Q9H013 955 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC7A7Q9UM01 511 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 MED31Q9Y3C7 131 aa9.44□□□□□ -0.9
PDLIM5-217ENST00000512274 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 TRBV11-1A0A0K0K1C0 115 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SMIM31A0A1B0GVY4 71 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC1A7O00341 560 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 CLIC3O95833 236 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ANGPTL1O95841 491 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GKN3PP0CG01 181 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GLI4P10075 376 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 JUNBP17275 347 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC1A3P43003 542 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GIPRP48546 466 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GAS1P54826 345 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC35A2P78381 396 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 NNATQ16517 81 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM44Q2T9K0 475 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 CTU2Q2VPK5 515 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF773Q6PK81 442 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 WDR88Q6ZMY6 472 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 HMGN2P46Q86SG4 172 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ATG4DQ86TL0 474 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 CXorf67Q86X51 503 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SULF2Q8IWU5 870 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms