RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GK3PQ14409 553 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 UBXN2BQ14CS0 331 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OXA1LQ15070 435 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 BSXQ3C1V8 233 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACSBG2Q5FVE4 666 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TNFAIP8L3Q5GJ75 292 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRAMEF17Q5VTA0 474 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 H3F3CQ6NXT2 135 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DNAJC24Q6P3W2 148 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DCUN1D2Q6PH85 259 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DOK6Q6PKX4 331 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 UGT2A3Q6UWM9 527 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF841Q6ZN19 808 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TPRG1Q6ZUI0 275 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ARPINQ7Z6K5 226 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CROCCP2Q86T23 111 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PDSS2Q86YH6 399 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LACC1Q8IV20 430 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MFSD6LQ8IWD5 586 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 EID3Q8N140 333 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CFAP52Q8N1V2 620 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 Q8N402 240 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR1L6Q8NGR2 347 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR14L1PQ8NHC6 308 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDS1Q92903 461 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TCEAL3Q969E4 200 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CREB3L1Q96BA8 519 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LMLNQ96KR4 655 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM210BQ96KR6 192 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SNX18Q96RF0 628 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 RSG1Q9BU20 258 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 KIFC1Q9BW19 673 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SIK2Q9H0K1 926 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SPNS1Q9H2V7 528 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NHEJ1Q9H9Q4 299 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CYSLTR2Q9NS75 346 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACSS1Q9NUB1 689 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PIPOXQ9P0Z9 390 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 BTNL2Q9UIR0 455 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SNX12Q9UMY4 172 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 GOLT1BQ9Y3E0 138 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 RNF115Q9Y4L5 304 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MMP24Q9Y5R2 645 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SNX10Q9Y5X0 201 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 A0A087X0K7 114 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TCRBV7S2A1N4TA0A589 114 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SAGE2PA6NJ88 616 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 H0Y980 276 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PCDH7O60245 1069 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 STC2O76061 302 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CLDN7O95471 211 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ANGPTL1O95841 491 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TFP02787 698 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DCNP07585 359 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NBEAP1P0C6P0 100 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 BGNP21810 368 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OTX1P32242 354 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 GJC1P36383 396 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 IER3P46695 156 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DUSP3P51452 185 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ATP1B3P54709 279 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MTCP1P56278 107 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 KCNK10P57789 538 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 FOXL2P58012 376 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MESP2Q0VG99 397 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF77Q15935 545 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LY6G5CQ5SRR4 150 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF648Q5T619 568 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NANOGP8Q6NSW7 305 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TRNP1Q6NT89 227 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 BTNL8Q6UX41 500 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MON1BQ7L1V2 547 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM214BQ7L5A3 538 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DPY19L4Q7Z388 723 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DHDDSQ86SQ9 333 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NT5DC3Q86UY8 548 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CIR1Q86X95 450 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM25Q86YD3 366 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM132CQ8N3T6 1108 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LRRC18Q8N456 261 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR10W1Q8NGF6 305 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR51G2Q8NGK0 314 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OLIG1Q8TAK6 271 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TRUB1Q8WWH5 349 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 RXFP2Q8WXD0 754 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 OVCA2Q8WZ82 227 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 IRF7Q92985 503 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ISL2Q96A47 359 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PPWD1Q96BP3 646 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CELF6Q96J87 481 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 JMJD8Q96S16 334 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF426Q9BUY5 554 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACTRT3Q9BYD9 372 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MROQ9BYG7 248 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF696Q9H7X3 374 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZFAND3Q9H8U3 227 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NLKQ9UBE8 527 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LSM7Q9UK45 103 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 MRTO4Q9UKD2 239 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 NDRG4Q9ULP0 352 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms