RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CELF2-AS1Q8N7Q2 184 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 LMNTD1Q8N9Z9 388 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 ARPC5LQ9BPX5 153 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 NUDT22Q9BRQ3 303 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 TCEAL2Q9H3H9 227 aaPredicted RBP9.85□□□□□ -0.83
NEK1-206ENST00000510533 LMAN1LQ9HAT1 526 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 PRMT8Q9NR22 394 aaPredicted RBP9.85□□□□□ -0.83
NEK1-206ENST00000510533 HSFX1Q9UBD0 423 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 SHPKQ9UHJ6 478 aa9.85□□□□□ -0.83
NEK1-206ENST00000510533 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 MSTNO14793 375 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SGCEO43556 437 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 HTR1FP30939 366 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SLC6A11P48066 632 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 MFGE8Q08431 387 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 SYT6Q5T7P8 510 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 PELI3Q8N2H9 469 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 TOE1Q96GM8 510 aaKnown RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 A4GALTQ9NPC4 353 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 C1orf123Q9NWV4 160 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SOCS6O14544 535 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 TCRBP04435 133 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 GAREM2Q75VX8 874 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 PSMF1Q92530 271 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 UPRTQ96BW1 309 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 CCNL2Q96S94 520 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 TMEM59Q9BXS4 323 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 C11orf54Q9H0W9 315 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 C1orf198Q9H425 327 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 FAM212BQ9NTI7 297 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 SNX11Q9Y5W9 270 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SUSD5O60279 629 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 CA3P07451 260 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 CD53P19397 219 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 UBE2KP61086 200 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 ZP2Q05996 745 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 NR0B2Q15466 257 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SLC35D2Q76EJ3 337 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 BPHLQ86WA6 291 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 OR13C9Q8NGT0 318 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 RAB3CQ96E17 227 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 RBMXL1Q96E39 390 aaKnown RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 CXorf36Q9H7Y0 433 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 LIN7BQ9HAP6 207 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SIDT1Q9NXL6 827 aaKnown RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 NAV1Q8NEY1 1877 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 TEX51A0A1B0GUA7 166 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 H7C1C5 153 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 RFXAPO00287 272 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
NEK1-206ENST00000510533 ITGB8P26012 769 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 TACR3P29371 465 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 IL2RGP31785 369 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 PPT1P50897 306 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 LCN6P62502 163 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 STK11Q15831 433 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 RTL10Q7L3V2 364 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 OR52I1Q8NGK6 324 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 OR10K1Q8NGX5 313 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 TMEM106AQ96A25 262 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 MAP3K3Q99759 626 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 CAMK2AQ9UQM7 478 aa9.84□□□□□ -0.83
NEK1-206ENST00000510533 SERINC4A6NH21 518 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 SYT5O00445 386 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 KCNK2O95069 426 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 FCGR2AP12318 317 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 JUNBP17275 347 aaPredicted RBP9.83□□□□□ -0.84
NEK1-206ENST00000510533 TNFSF4P23510 183 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 TNFRSF4P43489 277 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 FCN2Q15485 313 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 SFRP5Q5T4F7 317 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 HIST2H3PS2Q5TEC6 136 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 OPN5Q6U736 354 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 ALKAL1Q6UXT8 129 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 OR14A16Q8NHC5 309 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 MZB1Q8WU39 189 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 NEURL3Q96EH8 262 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 NIPSNAP1Q9BPW8 284 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 WDR76Q9H967 626 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 TAAR2Q9P1P5 351 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 RNF212BA8MTL3 300 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 CBX7O95931 251 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 FOXK2Q01167 660 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 C5orf46Q6UWT4 87 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 Q6ZNX1 250 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 NLRP8Q86W28 1048 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 SIAH3Q8IW03 269 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 OR2A12Q8NGT7 310 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 FGF13Q92913 245 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 MS4A8Q9BY19 250 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 TRDV1A0A1B0GX56 115 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 GNB3P16520 340 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 MAKP20794 623 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 REEP5Q00765 189 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 ACSM1Q08AH1 577 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 PDLIM3Q53GG5 364 aaPredicted RBP9.83□□□□□ -0.84
NEK1-206ENST00000510533 COX20Q5RI15 118 aa9.83□□□□□ -0.84
NEK1-206ENST00000510533 RDH10Q8IZV5 341 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms