RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF77Q15935 545 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 HACD4Q5VWC8 232 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 OR2T27Q8NH04 317 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ANKRD19PQ9H560 264 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 PCYT1BQ9Y5K3 369 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 A0A0A6YYC8 382 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 NAP1L6A6NFF2 107 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 I3L1I5 382 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 GMDSO60547 372 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 RAB3DO95716 219 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 HOXB2P14652 356 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 PBX2P40425 430 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 SHHQ15465 462 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ARHGAP40Q5TG30 622 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 GSG1LQ6UXU4 331 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 PRR22Q8IZ63 422 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ZNF101Q8IZC7 436 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 OR6V1Q8N148 313 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 TMEM106AQ96A25 262 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 MMABQ96EY8 250 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 CPNE2Q96FN4 548 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 APOOQ9BUR5 198 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 PITHD1Q9GZP4 211 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 ENKD1Q9H0I2 346 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 RLN2P04090 185 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 S100A9P06702 114 aaKnown RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 TBXA2RP21731 343 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 NUDT1P36639 197 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 SELENOPP49908 381 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 MFSD9Q8NBP5 474 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
USP38-202ENST00000510377 ZFYVE21Q9BQ24 234 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ALG12Q9BV10 488 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 ASF1BQ9NVP2 202 aa13.73□□□□□ -0.21
USP38-202ENST00000510377 S100A6P06703 90 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 NID1P14543 1247 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 AKR1C4P17516 323 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 GRM7Q14831 915 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 CD300LDQ6UXZ3 194 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 DPY19L4Q7Z388 723 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 RNF113BQ8IZP6 322 aaKnown RBP13.72□□□□□ -0.21
USP38-202ENST00000510377 OR9A4Q8NGU2 314 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 PRDM7Q9NQW5 492 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 CDC40O60508 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP38-202ENST00000510377 PPM1BO75688 479 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 IL12BP29460 328 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 S100A11P31949 105 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 FRKP42685 505 aaPredicted RBP13.72□□□□□ -0.21
USP38-202ENST00000510377 ALG10Q5BKT4 473 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 C19orf48Q6RUI8 117 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 KCTD20Q7Z5Y7 419 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 DLL4Q9NR61 685 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 GSKIPQ9P0R6 139 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 H0YGG7 62 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 SOX1O00570 391 aaPredicted RBP13.72□□□□□ -0.21
USP38-202ENST00000510377 GPR75O95800 540 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 UGT2B7P16662 529 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 CDK2P24941 298 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 AKR1C2P52895 323 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 ARF3P61204 181 aaPredicted RBP13.72□□□□□ -0.21
USP38-202ENST00000510377 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 GPNMBQ14956 572 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 RAB11BQ15907 218 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 LNX2Q8N448 690 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 TBL1XR1Q9BZK7 514 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 ZNF350Q9GZX5 532 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 PRTFDC1Q9NRG1 225 aa13.72□□□□□ -0.21
USP38-202ENST00000510377 SF3B6Q9Y3B4 125 aaKnown RBP13.72□□□□□ -0.21
USP38-202ENST00000510377 NRG2O14511 850 aaPredicted RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 ZNF432O94892 652 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 KNTC1P50748 2209 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 RUNX3Q13761 415 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ADAMTSL4Q6UY14 1074 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 GLB1L2Q8IW92 636 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 SPAG16Q8N0X2 631 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 FAM46BQ96A09 425 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 RNF170Q96K19 258 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ARHGDIGQ99819 225 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ACTR10Q9NZ32 417 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 DHDHQ9UQ10 334 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 SPTBN2O15020 2390 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 CENPVL1A0A0U1RR11 272 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ZNF705EA8MWA4 302 aaPredicted RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 LINC00303Q3SY05 128 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ZNF584Q8IVC4 421 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 OR2T4Q8NH00 348 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ST8SIA2Q92186 375 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 AHCYL2Q96HN2 611 aaKnown RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 FGF22Q9HCT0 170 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ING1Q9UK53 422 aaPredicted RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 ERVK-19Q9WJR5 959 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms