RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 SLC2A5P22732 501 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 PYCR1P32322 319 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 RPL4P36578 427 aaKnown RBP6.87□□□□□ -1.31
CAST-228ENST00000509903 DDOSTP39656 456 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 KIR2DL3P43628 341 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 GPR143P51810 404 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 OR12D2P58182 307 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 ZNF141Q15928 474 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 PRTGQ2VWP7 1150 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 KIRREL2Q6UWL6 708 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 Q6ZS52 159 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 CEACAM19Q7Z692 300 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 ZNF595Q8IYB9 648 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 LSMEM1Q8N8F7 131 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 SDR9C7Q8NEX9 313 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 OR52E2Q8NGJ4 325 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 OR4K13Q8NH42 304 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 ADAMTS18Q8TE60 1221 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 SGTBQ96EQ0 304 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 PSMG3-AS1Q96PY0 264 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 TIMP4Q99727 224 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 SOSTQ9BQB4 213 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 LRRC61Q9BV99 259 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 OR2B2Q9GZK3 357 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 RBFOX1Q9NWB1 397 aaKnown RBP6.87□□□□□ -1.31
CAST-228ENST00000509903 HAO2Q9NYQ3 351 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 FBXL4Q9UKA2 621 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 ERVK-19Q9WJR5 959 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 COL4A2P08572 1712 aa6.87□□□□□ -1.31
CAST-228ENST00000509903 A0A1W2PPC4 97 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 EFCAB7A8K855 629 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 CENPXA8MT69 81 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 C2CD4DB7Z1M9 353 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 LYRM1O43325 122 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 PLPP2O43688 288 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 IGLV3-19P01714 112 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 IL9P15248 144 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 RAB6AP20340 208 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SHC1P29353 583 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 HOXD12P35452 270 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ACVR1BP36896 505 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 MAP2K6P52564 334 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ATP12AP54707 1039 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 RAB1AP62820 205 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 E2F1Q01094 437 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ZNF85Q03923 595 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 FAM53BQ14153 422 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ERV3-1Q14264 604 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ZNF362Q5T0B9 420 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 FAAH2Q6GMR7 532 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 NPSR1Q6W5P4 371 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 RPTNQ6XPR3 784 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 METTL27Q8N6F8 245 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 Q8N9G6 341 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 OR6C4Q8NGE1 309 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 OR5M3Q8NGP4 307 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 SLC35B4Q969S0 331 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 TP53INP1Q96A56 240 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ZMYND19Q96E35 227 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 MMABQ96EY8 250 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SENP5Q96HI0 755 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 ST6GAL2Q96JF0 529 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 CNN2Q99439 309 aaKnown RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 MAP3K3Q99759 626 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 TMEM43Q9BTV4 400 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 TTTY10Q9BZA0 68 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 HDHD2Q9H0R4 259 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 TP63Q9H3D4 680 aaPredicted RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 ERVMER34-1Q9H9K5 563 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 TMEM165Q9HC07 324 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 B3GAT2Q9NPZ5 323 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SOHLH2Q9NX45 425 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 N6AMT1Q9Y5N5 214 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 OR2W5A6NFC9 320 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SERINC4A6NH21 518 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ZNF749O43361 778 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 FOXS1O43638 330 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 NSA2O95478 260 aaKnown RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 PROS1P07225 676 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 HIST1H1CP16403 213 aaKnown RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 ELK1P19419 428 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 MAOAP21397 527 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 CTSSP25774 331 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 NUDT1P36639 197 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 CAPZBP47756 277 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ACTA2P62736 377 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ACTG2P63267 376 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 BTG2P78543 158 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 LGALS3BPQ08380 585 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 RIN1Q13671 783 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 ELOCQ15369 112 aa6.86□□□□□ -1.31
CAST-228ENST00000509903 SF3B4Q15427 424 aaKnown RBP eCLIP6.86□□□□□ -1.31
CAST-228ENST00000509903 SF3A2Q15428 464 aaKnown RBP6.86□□□□□ -1.31
CAST-228ENST00000509903 NDUFAF6Q330K2 333 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms