RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MFSD13AQ14CX5 517 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 TRMT5Q32P41 509 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 ZNF672Q499Z4 452 aaPredicted RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 TSPO2Q5TGU0 170 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 YTHDF3Q7Z739 585 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 PATL1Q86TB9 770 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 RETREG3Q86VR2 466 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 RASSF5Q8WWW0 418 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 GTPBP3Q969Y2 492 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 C18orf12Q96KH6 178 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 MUS81Q96NY9 551 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 ZNF385AQ96PM9 386 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 ALG2Q9H553 416 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 MED4Q9NPJ6 270 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 POU2F3Q9UKI9 436 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 AMDHD2Q9Y303 409 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 FLNAP21333 2647 aaKnown RBP16.42■□□□□ 0.22
UBE3D-207ENST00000509102 ROS1P08922 2347 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 TRAV36DV7A0A075B6V5 113 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 DPRXA6NFQ7 191 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 BBIP1A8MTZ0 92 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 ZNF587BE7ETH6 402 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 ABCD4O14678 606 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 AKAP8O43823 692 aaKnown RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 MFN2O95140 757 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 WNT11O96014 354 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 ITGA5P08648 1049 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 HTR2AP28223 471 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 PTH2RP49190 550 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 C1DQ13901 141 aaKnown RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 GABRA6Q16445 453 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 GLIPR1L2Q4G1C9 344 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 COQ5Q5HYK3 327 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 C9orf135Q5VTT2 229 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 CREB3L2Q70SY1 520 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 PTOV1Q86YD1 416 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 SMYD1Q8NB12 490 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 KBTBD8Q8NFY9 601 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 SMAP2Q8WU79 429 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 KTI12Q96EK9 354 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 TRMT61AQ96FX7 289 aaKnown RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 BDH2Q9BUT1 245 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 KAT8Q9H7Z6 458 aaKnown RBP16.41■□□□□ 0.22
UBE3D-207ENST00000509102 B3GALT5Q9Y2C3 310 aa16.41■□□□□ 0.22
UBE3D-207ENST00000509102 FAM171A2A8MVW0 826 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 FTCDNL1E5RQL4 147 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 NPPAP01160 153 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 C8BP07358 591 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 PCGF2P35227 344 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ZNF83P51522 516 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 CDH11P55287 796 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ATP5J2P56134 94 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 PCBP3P57721 371 aaKnown RBP16.4■□□□□ 0.22
UBE3D-207ENST00000509102 PRPS1P60891 318 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 EGR4Q05215 589 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 DMTNQ08495 405 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 OR1Q1Q15612 314 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 NIPAL3Q6P499 406 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 SLC22A25Q6T423 547 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 SEZ6L2Q6UXD5 910 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 BIVMQ86UB2 503 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ZIC4Q8N9L1 334 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 PCYOX1LQ8NBM8 494 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 OR10A6Q8NH74 314 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ECSITQ9BQ95 431 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 PTDSS2Q9BVG9 487 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ASPNQ9BXN1 380 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 DLL4Q9NR61 685 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
UBE3D-207ENST00000509102 CORINQ9Y5Q5 1042 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 SLC25A15Q9Y619 301 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 RAI1Q7Z5J4 1906 aaPredicted RBP16.4■□□□□ 0.22
UBE3D-207ENST00000509102 ARID1AO14497 2285 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 C2CD3Q4AC94 2353 aa16.4■□□□□ 0.22
UBE3D-207ENST00000509102 A0A087WUJ7 227 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 A0A0B4J2E0 115 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 A0A1B0GX12 115 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 M0QX08 132 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 M0R1B8 84 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 PDLIM1O00151 329 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 FMO6PO60774 539 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 NQO1P15559 274 aaKnown RBP16.39■□□□□ 0.21
UBE3D-207ENST00000509102 PAX1P15863 534 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 CDH2P19022 906 aaPredicted RBP16.39■□□□□ 0.21
UBE3D-207ENST00000509102 PAX7P23759 505 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 P2RY4P51582 365 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 SELPLGQ14242 412 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 H1FNTQ75WM6 255 aaPredicted RBP16.39■□□□□ 0.21
UBE3D-207ENST00000509102 KRTAP1-3Q8IUG1 177 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 C10orf53Q8N6V4 93 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 OR6S1Q8NH40 331 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 Q96MF0 132 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 OXGR1Q96P68 337 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 MCHR1Q99705 422 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 AMBRA1Q9C0C7 1298 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 SLC17A5Q9NRA2 495 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF701Q9NV72 531 aaPredicted RBP16.39■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF446Q9NWS9 450 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 GID8Q9NWU2 228 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms