RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 KLK1P06870 262 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 H1F0P07305 194 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PET100P0DJ07 73 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 GP1BBP13224 206 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 POLR2EP19388 210 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 GCAP28676 217 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR1E1P30953 314 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CDKN2AP42771 156 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 NSG1P42857 185 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 QARSP47897 775 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 RFX5P48382 616 aaPredicted RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 RGS6P49758 472 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PGFP49763 221 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PDX1P52945 283 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CRISP1P54107 249 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 XGP55808 180 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SRSF1Q07955 248 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 ST3GAL1Q11201 340 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CNTN1Q12860 1018 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 MED21Q13503 144 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 ITPK1Q13572 414 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR4D1Q15615 310 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CTF1Q16619 201 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 RPEL1Q2QD12 228 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 FGD3Q5JSP0 725 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC35D3Q5M8T2 416 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SPOPLQ6IQ16 392 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PRR5LQ6MZQ0 368 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 ACSM5Q6NUN0 579 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 RAD9BQ6WBX8 426 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 TAC4Q86UU9 113 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 C2orf73Q8N5S3 287 aaPredicted RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CCDC112Q8NEF3 446 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR2L5Q8NG80 312 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR10A7Q8NGE5 316 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR10V1Q8NGI7 309 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 OR6N2Q8NGY6 317 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PIK3R3Q92569 461 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 NEIL2Q969S2 332 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 EME1Q96AY2 570 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 NEDD4LQ96PU5 975 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CDCA3Q99618 268 aaPredicted RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 NEURL2Q9BR09 285 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 TIMM29Q9BSF4 260 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 DCUN1D5Q9BTE7 237 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 TRAF4Q9BUZ4 470 aaPredicted RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PAPOLGQ9BWT3 736 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SLITRK2Q9H156 845 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 MMP28Q9H239 520 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 MAN1B1Q9UKM7 699 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CLEC4EQ9ULY5 219 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 STUB1Q9UNE7 303 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 PDE10AQ9Y233 779 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC17A4Q9Y2C5 497 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 AK6Q9Y3D8 172 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 RAI2Q9Y5P3 530 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 WIF1Q9Y5W5 379 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 HS3ST3B1Q9Y662 390 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 CDH10Q9Y6N8 788 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 ZMYM2Q9UBW7 1377 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 NACADO15069 1562 aa3.72□□□□□ -1.81
SMARCA5-202ENST00000508573 UBN2Q6ZU65 1347 aa3.71□□□□□ -1.81
SMARCA5-202ENST00000508573 FUOMA2VDF0 154 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 SAGE2PA6NJ88 616 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 SLC22A20A6NK97 555 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 SMIM23A6NLE4 172 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 CFLARO15519 480 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 C1orf105O95561 183 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 IFNA5P01569 189 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 KRT16P08779 473 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 SNRPAP09012 282 aaKnown RBP3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 HOXC6P09630 235 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 CALM1P0DP23 149 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 CALM2P0DP24 149 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 CALM3P0DP25 149 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 DPEP1P16444 411 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ATF6P18850 670 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 RAB4AP20338 218 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ZP3P21754 424 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 CA4P22748 312 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 DDOSTP39656 456 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 RBM34P42696 430 aaKnown RBP3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ALDH3B2P48448 385 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 TMED10P49755 219 aaKnown RBP3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 NKX2-5P52952 324 aaPredicted RBP3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ARF6P62330 175 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 NTHL1P78549 312 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ID2Q02363 134 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 ZNF33AQ06730 810 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 C2orf54Q08AI8 447 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 C2orf80Q0P641 193 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 MAD2L1BPQ15013 274 aaPredicted RBP3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 HLFQ16534 295 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 IDNKQ5T6J7 187 aa3.71□□□□□ -1.82
SMARCA5-202ENST00000508573 BTNL3Q6UXE8 466 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms