RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PPA1Q15181 289 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 ACKR1Q16570 336 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 DEFB113Q30KQ7 82 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 AAED1Q7RTV5 226 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF433Q8N7K0 673 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-209ENST00000508290 SCAIQ8N9R8 606 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 TAMM41Q96BW9 452 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 CMTM5Q96DZ9 223 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 MPP4Q96JB8 637 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 HOPXQ9BPY8 73 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-209ENST00000508290 TMEM204Q9BSN7 226 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 SLCO5A1Q9H2Y9 848 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 LIME1Q9H400 295 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 EFCAB1Q9HAE3 211 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 ARMCX1Q9P291 453 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 RCE1Q9Y256 329 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 MPDZO75970 2070 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 A0A1W2PPR1 153 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 CIB4A0PJX0 185 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 AKAP8O43823 692 aaKnown RBP17.54■□□□□ 0.4
SFXN1-209ENST00000508290 OPN1SWP03999 348 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 CD247P20963 164 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 P2RY4P51582 365 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 CDH12P55289 794 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 HACD2Q6Y1H2 254 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF704Q6ZNC4 412 aaPredicted RBP17.54■□□□□ 0.4
SFXN1-209ENST00000508290 CREB3L2Q70SY1 520 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 OR2T12Q8NG77 320 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 GPR32P1Q8NGA4 272 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 RNF217Q8TC41 542 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 SLC25A36Q96CQ1 311 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 RCN3Q96D15 328 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 KTI12Q96EK9 354 aaPredicted RBP17.54■□□□□ 0.4
SFXN1-209ENST00000508290 PLPPR2Q96GM1 343 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF583Q96ND8 569 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 SLC19A3Q9BZV2 496 aa17.54■□□□□ 0.4
SFXN1-209ENST00000508290 HRNRQ86YZ3 2850 aaPredicted RBP17.54■□□□□ 0.4
SFXN1-209ENST00000508290 ABCA4P78363 2273 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 IGKV1D-42A0A075B6H8 117 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 CCT8L1PA6NM43 557 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 M0R3H8 397 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 PDLIM1O00151 329 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 TPST2O60704 377 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 MT-ATP6P00846 226 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 COX4I1P13073 169 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF43P17038 809 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 CD53P19397 219 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 EDNRAP25101 427 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 NTF4P34130 210 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 FAPQ12884 760 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 STK11Q15831 433 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ADAM5Q6NVV9 412 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 H1FNTQ75WM6 255 aaPredicted RBP17.53■□□□□ 0.4
SFXN1-209ENST00000508290 CPLX4Q7Z7G2 160 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ZIC4Q8N9L1 334 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ANKK1Q8NFD2 765 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 OR6T1Q8NGN1 323 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 BOD1Q96IK1 185 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 MUS81Q96NY9 551 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 OXGR1Q96P68 337 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 HS3ST6Q96QI5 342 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ELAC2Q9BQ52 826 aaKnown RBP17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ASPNQ9BXN1 380 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 AMBRA1Q9C0C7 1298 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 MOV10Q9HCE1 1003 aaKnown RBP17.53■□□□□ 0.4
SFXN1-209ENST00000508290 RNF115Q9Y4L5 304 aa17.53■□□□□ 0.4
SFXN1-209ENST00000508290 MAGED1Q9Y5V3 778 aaPredicted RBP17.53■□□□□ 0.4
SFXN1-209ENST00000508290 ELOVL7A1L3X0 281 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 TRAPPC13A5PLN9 417 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 GMNCA6NCL1 334 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 IGHV3-9P01782 118 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 CD3EP07766 207 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 MPGP29372 298 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 HOXC12P31275 282 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 LSP1P33241 339 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 TSC22D1Q15714 1073 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 ENTPD8Q5MY95 495 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 NCMAPQ5T1S8 102 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 TSPO2Q5TGU0 170 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.52■□□□□ 0.4
SFXN1-209ENST00000508290 ADAMTS16Q8TE57 1224 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 TAAR8Q969N4 342 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 SLC41A3Q96GZ6 507 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF385AQ96PM9 386 aaKnown RBP17.52■□□□□ 0.4
SFXN1-209ENST00000508290 LINC00470Q9BZP3 86 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 UBTD1Q9HAC8 227 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 OBP2BQ9NPH6 170 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 SLC7A10Q9NS82 523 aa17.52■□□□□ 0.4
SFXN1-209ENST00000508290 M0R082 166 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 SNX3O60493 162 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 RAD51DO75771 328 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 KRT33AO76009 404 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 PRDX6P30041 224 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 SH3BGRP55822 239 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-209ENST00000508290 C1DQ13901 141 aaKnown RBP17.51■□□□□ 0.39
SFXN1-209ENST00000508290 GABRA6Q16445 453 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 KLHL17Q6TDP4 642 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 TMEM108Q6UXF1 575 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 LINC00114Q6XXX2 140 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms