RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ARSBP15848 533 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 CDKN2AP42771 156 aaKnown RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 ARL4DP49703 201 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 EGR4Q05215 589 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 LTBQ06643 244 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 CCDC58Q4VC31 144 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 LIX1LQ8IVB5 337 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 OR4M1Q8NGD0 313 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 SLC2A12Q8TD20 617 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 PELI1Q96FA3 418 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 NUDT9Q9BW91 350 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 EXTL2Q9UBQ6 330 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 SERTAD3Q9UJW9 196 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 GNG8Q9UK08 70 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 IGHV1OR21-1A0A087WYE8 117 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ELOA3DA6NLF2 546 aaPredicted RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 DCTN6O00399 190 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 PLPP2O43688 288 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 PIAS2O75928 621 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 UTS2O95399 124 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 GPANK1O95872 356 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 IFNGP01579 166 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 EIF4EP06730 217 aaKnown RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 DCNP07585 359 aaKnown RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 GPR143P51810 404 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ELOA3BQ3SY89 546 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ACSM3Q53FZ2 586 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 TCTE1Q5JU00 501 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ZNF57Q68EA5 555 aaPredicted RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 MZT2BQ6NZ67 158 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 SLC35F3Q8IY50 421 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ELOA3Q8NG57 546 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ZDHHC12Q96GR4 267 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 COQ7Q99807 217 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 EFCAB7A8K855 629 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 ERP29P30040 261 aaKnown RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 THBS2P35442 1172 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 SKP2Q13309 424 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 NSDHLQ15738 373 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 LANCL3Q6ZV70 420 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 ESPNLQ6ZVH7 1005 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 MARCH3Q86UD3 253 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 SAMD12Q8N8I0 201 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 CEP76Q8TAP6 659 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 FSCN3Q9NQT6 498 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 ICAM5Q9UMF0 924 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 H0YIG0 161 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 DDAH2O95865 285 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 C1QBP02746 253 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 UBL4AP11441 157 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 SPI1P17947 270 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 HTR2BP41595 481 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 RRAS2P62070 204 aaPredicted RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 TNK1Q13470 666 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 GPR176Q14439 515 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 LEG1Q6P5S2 330 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 ASB18Q6ZVZ8 466 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 OR4D9Q8NGE8 314 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 FOXN4Q96NZ1 517 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 NUDT22Q9BRQ3 303 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 KCNN2Q9H2S1 579 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
DDX41-208ENST00000507955 ST6GALNAC2Q9UJ37 374 aa13.22□□□□□ -0.29
DDX41-208ENST00000507955 FITM1A5D6W6 292 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 SCDO00767 359 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 OR7A10O76100 309 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 IFI6P09912 130 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDX41-208ENST00000507955 BTBD16Q32M84 506 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 DMKNQ6E0U4 476 aaPredicted RBP13.21□□□□□ -0.29
DDX41-208ENST00000507955 MTFR2Q6P444 385 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 SFXN4Q6P4A7 337 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 MZT2AQ6P582 158 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 TMPRSS9Q7Z410 1059 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 C9orf40Q8IXQ3 194 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 OR5H6Q8NGV6 325 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 SNX33Q8WV41 574 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 TRIM63Q969Q1 353 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 OR14A2Q96R54 314 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 NRIP3Q9NQ35 241 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 ENAMQ9NRM1 1142 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 PRODH2Q9UF12 536 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 ATXN7L1Q9ULK2 861 aaPredicted RBP13.21□□□□□ -0.29
DDX41-208ENST00000507955 CEP192Q8TEP8 1941 aa13.21□□□□□ -0.29
DDX41-208ENST00000507955 C2orf72A6NCS6 295 aa13.21□□□□□ -0.3
DDX41-208ENST00000507955 ANKRD61A6NGH8 418 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms