RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 C9orf135Q5VTT2 229 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 TWF2Q6IBS0 349 aaKnown RBP4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 FRA10AC1Q70Z53 315 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 NIPA1Q7RTP0 329 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 SCD5Q86SK9 330 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 MFSD6LQ8IWD5 586 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 MICU2Q8IYU8 434 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 GABRG1Q8N1C3 465 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 POM121L12Q8N7R1 296 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 PLPPR1Q8TBJ4 325 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 KIFAP3Q92845 792 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 HSFY1Q96LI6 401 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 ACTR6Q9GZN1 396 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 PDP1Q9P0J1 537 aaPredicted RBP4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 UBQLN1Q9UMX0 589 aaKnown RBP4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 PRSS21Q9Y6M0 314 aa4.82□□□□□ -1.64
AP001960.1-201ENST00000506494 USP47Q96K76 1375 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 PHLPP2Q6ZVD8 1323 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 SMCO2A6NFE2 343 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 LRRIQ3A6PVS8 624 aaPredicted RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 BOLA2-SMG1P6H3BVE0 249 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 WWP2O00308 870 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 GOSR2O14653 212 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 OR2F2O95006 317 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 C1orf105O95561 183 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 ANXA5P08758 320 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 CT62P0C5K7 136 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 GATA1P15976 413 aaPredicted RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 ZNF43P17038 809 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 NPR2P20594 1047 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 ATP6V1B2P21281 511 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 MRPS22P82650 360 aaKnown RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 SPAG1Q07617 926 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 TMED1Q13445 227 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 MRPL23Q16540 153 aaKnown RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 LRRC36Q1X8D7 754 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 PAN3Q58A45 887 aaKnown RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 MARCH8Q5T0T0 291 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 WDR74Q6RFH5 385 aaPredicted RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 SASS6Q6UVJ0 657 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 Q6ZN92 141 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 OR52I1Q8NGK6 324 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 CCDC126Q96EE4 140 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 NAF1Q96HR8 494 aaKnown RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 KCNA7Q96RP8 456 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 LYARQ9NX58 379 aaKnown RBP4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 PTTG3PQ9NZH4 202 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 KLHL21Q9UJP4 597 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 KLK13Q9UKR3 277 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 TBC1D24Q9ULP9 559 aa4.81□□□□□ -1.64
AP001960.1-201ENST00000506494 IGHV3-35A0A0C4DH35 117 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 CDX4O14627 284 aaPredicted RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 PPP1R2P9O14990 202 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 C2P06681 752 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 CCDC166P0CW27 439 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 HMOX2P30519 316 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 OR1G1P47890 313 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 UQCRFS1P47985 274 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 RAB10P61026 200 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 OR2B11Q5JQS5 317 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 TMEM220Q6QAJ8 160 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 CXCL17Q6UXB2 119 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 SLC25A48Q6ZT89 311 aaKnown RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 SLC16A14Q7RTX9 510 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 ZNF571Q7Z3V5 609 aaPredicted RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 SLC26A11Q86WA9 606 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 C17orf82Q86X59 251 aaPredicted RBP4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 OR4A4PQ8NGN8 299 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 OR9A1PQ8NGU1 263 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 SGK3Q96BR1 496 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 CMTM7Q96FZ5 175 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 RANBP9Q96S59 729 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 P2RY13Q9BPV8 354 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 RNF126Q9BV68 326 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 CCNB1IP1Q9NPC3 277 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 GIN1Q9NXP7 522 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 TREM2Q9NZC2 230 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 KCNIP1Q9NZI2 227 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 B4GALT7Q9UBV7 327 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 DCDC2Q9UHG0 476 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 TRAF3IP3Q9Y228 551 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 V9GY05 133 aa4.8□□□□□ -1.64
AP001960.1-201ENST00000506494 IGHV1OR15-1A0A075B7D0 117 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 IGHV1OR21-1A0A087WYE8 117 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 IGHV7-81A0A0B4J1V7 117 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 RAB29O14966 203 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 AKR7A2O43488 359 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 PI15O43692 258 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 CCNB1P14635 433 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 GDF1P27539 372 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 ATP5C1P36542 298 aaKnown RBP4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 NAMPTP43490 491 aa4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 CSNK1EP49674 416 aaKnown RBP4.79□□□□□ -1.64
AP001960.1-201ENST00000506494 EIF3EP60228 445 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms