RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SNTNA6NMZ2 147 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CYSRT1A8MQ03 144 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 FCN1O00602 326 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SLC17A2O00624 439 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 POLR2DO15514 142 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CABYRO75952 493 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 NOL4O94818 638 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 KBTBD11O94819 623 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 GJB5O95377 273 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PIGRP01833 764 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CD55P08174 381 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 HSPD1P10809 573 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SLC2A3P11169 496 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 BCL3P20749 454 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 RPL13AP40429 203 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 EFNB2P52799 333 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CDH4P55283 916 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 C1orf61Q13536 156 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 DPYSL3Q14195 570 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 LTB4RQ15722 352 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 IMMTQ16891 758 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 QRICH1Q2TAL8 776 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 HSDL1Q3SXM5 330 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SLC25A52Q3SY17 297 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TIGITQ495A1 244 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SFT2D3Q587I9 215 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CEP85LQ5SZL2 805 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 WSCD1Q658N2 575 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TPGS2Q68CL5 300 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF343Q6P1L6 599 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PAQR6Q6TCH4 344 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF600Q6ZNG1 722 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SLC25A42Q86VD7 318 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TPRA1Q86W33 373 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SERPINA9Q86WD7 417 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 HIPK1Q86Z02 1210 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TGIF2LXQ8IUE1 241 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF440Q8IYI8 595 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 MYOCDQ8IZQ8 938 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 Q8N377 158 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 KIR3DL3Q8N743 410 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 C17orf47Q8NEP4 570 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 OR51G2Q8NGK0 314 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 OR5L2Q8NGL0 311 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 OR6T1Q8NGN1 323 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 VN1R17PQ8TDU5 208 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ADAMTS16Q8TE57 1224 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SCFD1Q8WVM8 642 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 RASL10AQ92737 203 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 EFHD2Q96C19 240 aaPredicted RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PPP1R16AQ96I34 528 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF599Q96NL3 588 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TAAR1Q96RJ0 339 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 COPS8Q99627 209 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CITED1Q99966 193 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 VGLL1Q99990 258 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 RBM4BQ9BQ04 359 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 NIPSNAP3BQ9BS92 247 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TM2D1Q9BX74 207 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ELOVL4Q9GZR5 314 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 GLT8D2Q9H1C3 349 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 IKZF5Q9H5V7 419 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 UBE2ZQ9H832 354 aaPredicted RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 METTL7AQ9H8H3 244 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 POLE4Q9NR33 117 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 NANSQ9NR45 359 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PNO1Q9NRX1 252 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SIGLEC8Q9NYZ4 499 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 MDFICQ9P1T7 246 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 ARMCX1Q9P291 453 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SUN2Q9UH99 717 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 SCML2Q9UQR0 700 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 POLDIP2Q9Y2S7 368 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 MEMO1Q9Y316 297 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 AK6Q9Y3D8 172 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 L3MBTL1Q9Y468 752 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 TIMM10BQ9Y5J6 103 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 STYXL1Q9Y6J8 313 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PRSS21Q9Y6M0 314 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 DMDP11532 3685 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 PRRC2BQ5JSZ5 2229 aaKnown RBP2.54□□□□□ -2
TRAPPC11-205ENST00000506426 REV3LO60673 3130 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 LCTP09848 1927 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 NCOR1O75376 2440 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ABCB11O95342 1321 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 WDR19Q8NEZ3 1342 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 RAD50Q92878 1312 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ARHGEF35A5YM69 484 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF840PA6NDX5 716 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ACOD1A6NK06 481 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 OR52A4PA6NMU1 304 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 B4DXG7 233 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 E7ESA3 106 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GOLGA8SH3BPF8 625 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SAP18O00422 153 aaKnown RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 NBR2O15453 112 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF264O43296 627 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TIMM8AO60220 97 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ERLIN1O75477 346 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SLC2A10O95528 541 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms