RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CLDN17P56750 224 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 ARF1P84077 181 aaKnown RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 ROR2Q01974 943 aaKnown RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 FUT5Q11128 374 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 SNTB2Q13425 540 aaKnown RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 C1DQ13901 141 aaKnown RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 DAG1Q14118 895 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 ALKBH6Q3KRA9 238 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 ZNF311Q5JNZ3 666 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 MRPL2Q5T653 305 aaKnown RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 FAHD2BQ6P2I3 314 aaPredicted RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 ANKRD16Q6P6B7 361 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 RNF165Q6ZSG1 346 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 NUDCD3Q8IVD9 361 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 RIMKLAQ8IXN7 391 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 PEX5LQ8IYB4 626 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 CDK20Q8IZL9 346 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 CNPY4Q8N129 248 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 FAM71CQ8NEG0 241 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 OR4F15Q8NGB8 312 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 KIF18AQ8NI77 898 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 TCP10LQ8TDR4 215 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 ZNF418Q8TF45 676 aaPredicted RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
SNF8-204ENST00000506104 TMEM45BQ96B21 275 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 FAHD2AQ96GK7 314 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 PKNOX2Q96KN3 472 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 ANKRD27Q96NW4 1050 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 PANX1Q96RD7 426 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 OBP2BQ9NPH6 170 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 POLE3Q9NRF9 147 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 FZR1Q9UM11 496 aa7.16□□□□□ -1.26
SNF8-204ENST00000506104 PRSS51A0A1B0GVH4 220 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 CCDC154A6NI56 674 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 LIPT2A6NK58 231 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 AQP7P3A6NL99 342 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 HMGN4O00479 90 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 DNAJA2O60884 412 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 LILRA1O75019 489 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 SLC43A1O75387 559 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 VENTXO95231 258 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 AHSA1O95433 338 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 C1QCP02747 245 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 DBIP07108 87 aaKnown RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 ZNF43P17038 809 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 GPR6P46095 362 aaPredicted RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 RPS5P46782 204 aaKnown RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 H3F3AP84243 136 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 EMX2Q04743 252 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 PIGFQ07326 219 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 EPS8Q12929 822 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 FAM174BQ3ZCQ3 159 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 SPANXN4Q5MJ08 99 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 C1orf140Q5VVS0 124 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 SAXO2Q658L1 398 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 CREB3L2Q70SY1 520 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 MEX3DQ86XN8 651 aaKnown RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 VRK2Q86Y07 508 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 TRIML2Q8N7C3 387 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 ZIC4Q8N9L1 334 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 MGARPQ8TDB4 240 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 BCL2L2Q92843 193 aaPredicted RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 ZBTB9Q96C00 473 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 LRRC37BQ96QE4 947 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 SYT3Q9BQG1 590 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 SF3B5Q9BWJ5 86 aaKnown RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 TXLNGYQ9BZA5 131 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 AKTIPQ9H8T0 292 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 PPCSQ9HAB8 311 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 EXOSC3Q9NQT5 275 aaKnown RBP7.15□□□□□ -1.26
SNF8-204ENST00000506104 RLIMQ9NVW2 624 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 TREM2Q9NZC2 230 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 RPS6KB2Q9UBS0 482 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 GRIP1Q9Y3R0 1128 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 CMAHPQ9Y471 501 aa7.15□□□□□ -1.26
SNF8-204ENST00000506104 A0A1W2PPW3 197 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 PRAMEF27A3QJZ7 478 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 AGAP5A6NIR3 686 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 A8MVM7 634 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 M0R3G1 203 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 TPD52L2O43399 206 aaKnown RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 PPIHO43447 177 aaKnown RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 FRS3O43559 492 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 ITM2AO43736 263 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 SERPINI2O75830 405 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 PDE5AO76074 875 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 ANP32DO95626 131 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 SAGP10523 405 aaPredicted RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 ARRB2P32121 409 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 CRATP43155 626 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 ALDH3B1P43353 468 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 CLNS1AP54105 237 aaKnown RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 DVL1P1P54792 670 aaPredicted RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 CDH15P55291 814 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 HOXC5Q00444 222 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 GALK2Q01415 458 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 HGFACQ04756 655 aa7.14□□□□□ -1.27
SNF8-204ENST00000506104 MAD2L1BPQ15013 274 aaPredicted RBP7.14□□□□□ -1.27
SNF8-204ENST00000506104 EFNB3Q15768 340 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms