RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KLK12Q9UKR0 248 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 A0A0G2JN53 185 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 LOC110117498-PIK3R3F6TDL0 507 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 H0YCG3 227 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 RTL8CO15255 209 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 SNNO75324 88 aaPredicted RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 SCGNO76038 276 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 NCK1P16333 377 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ABOP16442 354 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 CCR6P51684 374 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ASPHQ12797 758 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 SFT2D3Q587I9 215 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ATAD3BQ5T9A4 648 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 AGBL2Q5U5Z8 902 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 GPR157Q5UAW9 335 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 CTRB2Q6GPI1 263 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ZSCAN25Q6NSZ9 544 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 C6orf89Q6UWU4 347 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 COX15Q7KZN9 410 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 NLRP9Q7RTR0 991 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ZNF786Q8N393 782 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 TMEM158Q8WZ71 300 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 UFD1Q92890 307 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 ITCHQ96J02 903 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 RBM14Q96PK6 669 aaKnown RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 SLC38A2Q96QD8 506 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 NHEJ1Q9H9Q4 299 aaPredicted RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 EML4Q9HC35 981 aaKnown RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 MYOZ2Q9NPC6 264 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 POLE4Q9NR33 117 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 C6orf203Q9P0P8 240 aaPredicted RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 ZNF223Q9UK11 482 aaPredicted RBP2.55□□□□□ -2
TOPBP1-204ENST00000505804 WSB1Q9Y6I7 421 aa2.55□□□□□ -2
TOPBP1-204ENST00000505804 PTCH1Q13635 1447 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 IGLV3-16A0A075B6K0 115 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 KIR2DL5BA0A0G2JN68 375 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 KIR2DL5BA0A0G2JPC4 375 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 IQANK1A0A1B0GTG1 560 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 RBMY1BA6NDE4 496 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 RBMY1EA6NEQ0 496 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 A8MXQ7 604 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 MED7O43513 233 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 PRKAB2O43741 272 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 RHOBTB1O94844 696 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 IGKV3-11P04433 115 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 RBMY1DP0C7P1 496 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 RBMY1A1P0DJD3 496 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 CRISP2P16562 243 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 CCR1P32246 355 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 GRIA1P42261 906 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 SPIBQ01892 262 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 PLD1Q13393 1074 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 TAF7Q15545 349 aaPredicted RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 ECHDC2Q86YB7 292 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 KIR2DL5AQ8N109 375 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 FAM133AQ8N9E0 248 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 MFSD9Q8NBP5 474 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 ZNF540Q8NDQ6 660 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 KIR2DL5BQ8NHK3 375 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 ACER1Q8TDN7 264 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 CLCC1Q96S66 551 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 YY1AP1Q9H869 796 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 GORASP2Q9H8Y8 452 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 SIAEQ9HAT2 523 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 QPCTLQ9NXS2 382 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 KCNIP1Q9NZI2 227 aa2.54□□□□□ -2
TOPBP1-204ENST00000505804 NUFIP1Q9UHK0 495 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 DDX49Q9Y6V7 483 aaKnown RBP2.54□□□□□ -2
TOPBP1-204ENST00000505804 PDS5BQ9NTI5 1447 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 ZNFX1Q9P2E3 1918 aaKnown RBP2.53□□□□□ -2
TOPBP1-204ENST00000505804 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 C15orf38-AP3S2A0A0A6YYH1 394 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 ANKRD63C9JTQ0 380 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 TMX2-CTNND1H3BSU7 103 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 PES1O00541 588 aaKnown RBP2.53□□□□□ -2
TOPBP1-204ENST00000505804 HSD17B6O14756 317 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 RAMP3O60896 148 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 SLC25A27O95847 323 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 POU2F1P14859 743 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 TNFRSF17Q02223 184 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 LRRC63Q05C16 580 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 FGL1Q08830 312 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 PDIA2Q13087 525 aaKnown RBP2.53□□□□□ -2
TOPBP1-204ENST00000505804 GPNMBQ14956 572 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 PDZK1Q5T2W1 519 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 FRMPD2BQ6IN97 320 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 C1orf94Q6P1W5 598 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 ZNF621Q6ZSS3 439 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 STEAP2Q8NFT2 490 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 IPMKQ8NFU5 416 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 OR51G1Q8NGK1 321 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 OR6X1Q8NH79 312 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 SCFD1Q8WVM8 642 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 CXorf40BQ96DE9 158 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 COQ2Q96H96 371 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms