RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 LRRC18Q8N456 261 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZSCAN1Q8NBB4 408 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF417Q8TAU3 575 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF587Q96SQ5 575 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 SYNPO2LQ9H987 977 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 A4GNTQ9UNA3 340 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 TMEM269A0A1B0GVZ9 245 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 UCHL1P09936 223 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TGFBR1P36897 503 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 CLDN17P56750 224 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 FAM69AQ5T7M9 428 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TCEAL6Q6IPX3 200 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TCEAL3Q969E4 200 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 PLA2G12AQ9BZM1 189 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 GABRPO00591 440 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TGFBR2P37173 567 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 GNG2P59768 71 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 ADPRMQ3LIE5 342 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 NARS2Q96I59 477 aaKnown RBP12.93□□□□□ -0.34
TCOF1-207ENST00000504761 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
TCOF1-207ENST00000504761 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 INMT-MINDY4F8WBC2 141 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 SLC19A2O60779 497 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 OR7A10O76100 309 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 CD63P08962 238 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 CLEC2LP0C7M8 214 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 HIST1H1CP16403 213 aaKnown RBP12.93□□□□□ -0.34
TCOF1-207ENST00000504761 EPHA4P54764 986 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 FNDC8Q8TC99 324 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 THOC3Q96J01 351 aaKnown RBP12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TEAD3Q99594 435 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 SH3BGRL2Q9UJC5 107 aa12.93□□□□□ -0.34
TCOF1-207ENST00000504761 TRBV5-3A0A0A0MS03 114 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CENPBD1B2RD01 187 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 PHYHO14832 338 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SELENOFO60613 162 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 IGHG1P01857 330 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CD79AP11912 226 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 HTR1FP30939 366 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 RFC3P40938 356 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CLDN12P56749 244 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CSNK2A1P68400 391 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 C6orf15Q6UXA7 325 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 OR6C70A6NIJ9 312 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 HRKO00198 91 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 RBBP9O75884 186 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DUSP2Q05923 314 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SNTB2Q13425 540 aaKnown RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 MLC1Q15049 377 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DPY19L2P2Q6ZN68 376 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 GRINAQ7Z429 371 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ABHD12BQ7Z5M8 362 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 YRDCQ86U90 279 aaKnown RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 LRRC56Q8IYG6 542 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DIMT1Q9UNQ2 313 aaKnown RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 YARS2Q9Y2Z4 477 aaKnown RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ACACAQ13085 2346 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 HPGDSO60760 199 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SEC14L2O76054 403 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 GTF2F2P13984 249 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ETV5P41161 510 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 MAP2K3P46734 347 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 ETV1P50549 477 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 P2RX1P51575 399 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CCL11P51671 97 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 RNF4P78317 190 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SPEM2Q0P670 501 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SFRP4Q6FHJ7 346 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 FCAMRQ8WWV6 532 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 THRSPQ92748 146 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SLC41A2Q96JW4 573 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 TWSG1Q9GZX9 223 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DUSP21Q9H596 190 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 POLHQ9Y253 713 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 TRAV18A0A075B6X5 111 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 DDAH2O95865 285 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SHC1P29353 583 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 TNFSF8P32971 234 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 GRK5P34947 590 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 CYB561P49447 251 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 UBE2IP63279 158 aaKnown RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 SYT6Q5T7P8 510 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-207ENST00000504761 KMT5CQ86Y97 462 aa12.92□□□□□ -0.34
TCOF1-207ENST00000504761 FAM46BQ96A09 425 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms