RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PRKCDQ05655 676 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 C5orf46Q6UWT4 87 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 ZNF771Q7L3S4 317 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 AMIGO2Q86SJ2 522 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 OR4K5Q8NGD3 323 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RNF128Q8TEB7 428 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RND1Q92730 232 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 NAA11Q9BSU3 229 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 ANKRD19PQ9H560 264 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 REEP1Q9H902 201 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RNF122Q9H9V4 155 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 ING1Q9UK53 422 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RNF6Q9Y252 685 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 SLC5A6Q9Y289 635 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 SAMHD1Q9Y3Z3 626 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 AQP7P3A6NL99 342 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 H3BNX3 289 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 CLOCKO15516 846 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 OR2T1O43869 369 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 CYTIPO60759 359 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 ZG16O60844 167 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 RCBTB2O95199 551 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 HPRP00739 348 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 IL2RAP01589 272 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 TIMP3P35625 211 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 OMPP47874 163 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 H3F3AP84243 136 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 IL1RL1Q01638 556 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 RASGEF1BQ0VAM2 473 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 PMS2P3Q13401 168 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 CDSNQ15517 529 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 RIPPLY2Q5TAB7 128 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 ANKRD34AQ69YU3 496 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 HMBOX1Q6NT76 420 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 PAQR6Q6TCH4 344 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 MCEMP1Q8IX19 187 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 TUSC5Q8IXB3 177 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 CNEP1R1Q8N9A8 125 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 OR9Q2Q8NGE9 314 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 OR6S1Q8NH40 331 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 BPIFA2Q96DR5 249 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 GPA33Q99795 319 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 TM9SF2Q99805 663 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 ASPNQ9BXN1 380 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 KLHL4Q9C0H6 718 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 NTN4Q9HB63 628 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 CHST11Q9NPF2 352 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 NANSQ9NR45 359 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 ARMC1Q9NVT9 282 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 DNAJB9Q9UBS3 223 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 TMCC3Q9ULS5 477 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
PDLIM7-212ENST00000504380 A0A1W2PNV4 684 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 ZNF716A6NP11 495 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 EFCAB9A8MZ26 197 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 MS4A18H0YCH9 400 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 PLPP3O14495 311 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 CDC42EP2O14613 210 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 DNPH1O43598 174 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 OR10H3O60404 316 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 EIF1BO60739 113 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 SERPINI2O75830 405 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 KRT36O76013 467 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 CCNB2O95067 398 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 PLGP00747 810 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 HLA-DOBP13765 273 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 PRKACGP22612 351 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 HMGA2P52926 109 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 CTBP2P56545 445 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 MS4A18Q3C1V0 323 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 TMEM225Q6GV28 225 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 ABLIM2Q6H8Q1 611 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 VWA1Q6PCB0 445 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 H1FNTQ75WM6 255 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 NUFIP2Q7Z417 695 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 ZER1Q7Z7L7 766 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 GPAT4Q86UL3 456 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 RNF113BQ8IZP6 322 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 OR13C2Q8NGS9 318 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 MOSPD2Q8NHP6 518 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 PIGXQ8TBF5 258 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
PDLIM7-212ENST00000504380 PKP2Q99959 881 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms