RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 RBMS2Q15434 407 aaKnown RBP15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 Q499Y3 187 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM207Q6UWW9 146 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 GDF7Q7Z4P5 450 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 PIGCQ92535 297 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 EHFQ9NZC4 300 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 TIMM8BQ9Y5J9 83 aaPredicted RBP15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 PLSCR5A0PG75 271 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 MPPED1O15442 326 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 CTNSO60931 367 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 BCL6P41182 706 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 CAV3P56539 151 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 MFSD12Q6NUT3 480 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC16A14Q7RTX9 510 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 SPPL3Q8TCT6 385 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 PSD2Q9BQI7 771 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF286AQ9HBT8 521 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 KCNJ16Q9NPI9 418 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 NDUFAF4Q9P032 175 aa15.33■□□□□ 0.04
PCDHA1-203ENST00000504120 ACOD1A6NK06 481 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 H3BNC9 293 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 CD46P15529 392 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 HMGA1P17096 107 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 CLDN6P56747 220 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 ACVR1Q04771 509 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 MED25Q71SY5 747 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 EID2Q8N6I1 236 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 ABHD4Q8TB40 342 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 ULBP3Q9BZM4 244 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 OTOL1A6NHN0 477 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 HSD17B7P56937 341 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 OR6V1Q8N148 313 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 CPT1CQ8TCG5 803 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 WFDC5Q8TCV5 224 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 KIR3DX1Q9H7L2 352 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 CORINQ9Y5Q5 1042 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 HS3ST3A1Q9Y663 406 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 PEX14O75381 377 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 SNRPBP14678 240 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 PLGLAQ15195 96 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 POC1BQ8TC44 478 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 GIMAP5Q96F15 307 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 MICU1Q9BPX6 476 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 CMSS1Q9BQ75 279 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 NOX4Q9NPH5 578 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 TMED7-TICAM2A0A0A6YYA0 188 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 UBBP0CG47 229 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 UBCP0CG48 685 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 LIPCP11150 499 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 ALDH3B1P43353 468 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 RPL34P49207 117 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 AFMIDQ63HM1 303 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 GIMAP1Q8WWP7 306 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 MIB2Q96AX9 1013 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 NIPSNAP1Q9BPW8 284 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 PISDQ9UG56 409 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 TMED7Q9Y3B3 224 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 ATG4BQ9Y4P1 393 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 NME7Q9Y5B8 376 aa15.32■□□□□ 0.04
PCDHA1-203ENST00000504120 HMX2A2RU54 273 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TLCD2A6NGC4 264 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 IFNA17P01571 189 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TK1P04183 234 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 HTR2CP28335 458 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SSR4P51571 173 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SFXN4Q6P4A7 337 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 LYPD4Q6UWN0 246 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 PHYHIPQ92561 330 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 GPR78Q96P69 363 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 HEMK1Q9Y5R4 338 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SIGLEC6O43699 453 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 EVI2BP34910 448 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 HTR5AP47898 357 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TNK1Q13470 666 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CRMP1Q14194 572 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SMAD2Q15796 467 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 KDM4DQ6B0I6 523 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 LAX1Q8IWV1 398 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 STK35Q8TDR2 534 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM255BQ8WV15 326 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 IL1F10Q8WWZ1 152 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 MALSU1Q96EH3 234 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 NMNAT3Q96T66 252 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 KIF25Q9UIL4 384 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 FBXO7Q9Y3I1 522 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 PRKRAO75569 313 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 ETV5P41161 510 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CSNK1EP49674 416 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 KIAA1024LP59773 190 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 RPS27AP62979 156 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 UBA52P62987 128 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CCSMST1Q4G0I0 132 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 DCAF12Q5T6F0 453 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 METRNLQ641Q3 311 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 NRARPQ7Z6K4 114 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms