RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ADAD1Q96M93 576 aaKnown RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 HS6ST2Q96MM7 605 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 ZNF385AQ96PM9 386 aaKnown RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 ZNF607Q96SK3 696 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 DHRS9Q9BPW9 319 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 FKRPQ9H9S5 495 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 BARX1Q9HBU1 254 aaPredicted RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 SLC25A37Q9NYZ2 338 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 NPAP1Q9NZP6 1156 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 SELENONQ9NZV5 590 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 SLC13A4Q9UKG4 626 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 RASD1Q9Y272 281 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CHST2Q9Y4C5 530 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 PRORSD1PA6NEY8 169 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 HMGB1P1B2RPK0 211 aaPredicted RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 PNMTP11086 282 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 ZNF43P17038 809 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 GPX2P18283 190 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 GTF2E2P29084 291 aaKnown RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 PRKAR1BP31321 381 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 TTKP33981 857 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 RPS5P46782 204 aaKnown RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 CDH11P55287 796 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 FOXG1P55316 489 aaPredicted RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 VEZF1Q14119 521 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 RAB35Q15286 201 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 PAGE3Q5JUK9 113 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 KLHL24Q6TFL4 600 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 FBXL14Q8N1E6 418 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 LSMEM1Q8N8F7 131 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 BHLHE22Q8NFJ8 381 aaPredicted RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 NFKBIDQ8NI38 313 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 TRAF4Q9BUZ4 470 aaPredicted RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
MED28-203ENST00000503945 REG4Q9BYZ8 158 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 SLCO5A1Q9H2Y9 848 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 C12orf10Q9HB07 376 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 TMEM27Q9HBJ8 222 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 SLC17A5Q9NRA2 495 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 VAPAQ9P0L0 249 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 B3GALT5Q9Y2C3 310 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 CR1P17927 2039 aa10.49□□□□□ -0.73
MED28-203ENST00000503945 E7EQL1 145 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 FRS3O43559 492 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 NPIPB7O75200 414 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 CRLF1O75462 422 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 PTNP21246 168 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 ATP4BP51164 291 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 KRTAP1-1Q07627 177 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 C1DQ13901 141 aaKnown RBP10.48□□□□□ -0.73
MED28-203ENST00000503945 SQLEQ14534 574 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 NRF1Q16656 503 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 ULK3Q6PHR2 472 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 C5orf46Q6UWT4 87 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 DTX2Q86UW9 622 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 KDM8Q8N371 416 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 MUC15Q8N387 334 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 RNF217Q8TC41 542 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 MAGEB18Q96M61 343 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 OXGR1Q96P68 337 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 RHNO1Q9BSD3 238 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 AMBRA1Q9C0C7 1298 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 TMEM38AQ9H6F2 299 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 SLC52A3Q9NQ40 469 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
MED28-203ENST00000503945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.48□□□□□ -0.73
MED28-203ENST00000503945 NDUFAF1Q9Y375 327 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 GMEB1Q9Y692 573 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 ATP23Q9Y6H3 246 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 FREM1Q5H8C1 2179 aa10.48□□□□□ -0.73
MED28-203ENST00000503945 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 ATRQ13535 2644 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 SSX4O60224 188 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 TPST1O60507 370 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 TP53P04637 393 aaPredicted RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 ARAFP10398 606 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 APOBEC3AP31941 199 aaPredicted RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 ACVR1BP36896 505 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 P2RY4P51582 365 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 UBE2NP61088 152 aaKnown RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 CHRNB3Q05901 458 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 SCARB2Q14108 478 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 RUNDC3AQ59EK9 446 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 TTMPQ5BVD1 217 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 ALG10BQ5I7T1 473 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 HMBOX1Q6NT76 420 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 NIPAL3Q6P499 406 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 DHRS4L2Q6PKH6 230 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 H1FNTQ75WM6 255 aaPredicted RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 EPHX4Q8IUS5 362 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 MSRB3Q8IXL7 192 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 MAPK1IP1LQ8NDC0 245 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms