RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 COPS4Q9BT78 406 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 OR2B2Q9GZK3 357 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM192AQ9GZU8 254 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FANCFQ9NPI8 374 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 INIPQ9NRY2 104 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 WASF3Q9UPY6 502 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PCDHGB7Q9Y5F8 929 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF292O60281 2723 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 DOCK10Q96BY6 2186 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PCSK5Q92824 1860 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 TRAV17A0A0B4J275 112 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SMIM31A0A1B0GVY4 71 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 A0A1W2PRG6 482 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ZC3H12DA2A288 527 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 OR2M5A3KFT3 312 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LRRC3CA6NJW4 275 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LIPT2A6NK58 231 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC22A31A6NKX4 558 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 A6NL46 340 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 B4DXG7 233 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 MCIDASD6RGH6 385 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 FTCDNL1E5RQL4 147 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 H3BML4 177 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PLPP3O14495 311 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 EFSO43281 561 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 RNF13O43567 381 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 XPNPEP2O43895 674 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ZIC3O60481 467 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ENTPD6O75354 484 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SMNDC1O75940 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PPP1R3DO95685 299 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 IGHMP01871 453 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CDK1P06493 297 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ADORA3P0DMS8 318 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ATP6V1B1P15313 513 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 JUNBP17275 347 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ACVR2AP27037 513 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 GDF1P27539 372 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 DCKP27707 260 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 GRPRP30550 384 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 HTR1FP30939 366 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 AQP2P41181 271 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC15A1P46059 708 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CENPAP49450 140 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 DAP3P51398 398 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 UCNP55089 124 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CDH11P55287 796 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CTXN1P60606 82 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC35A1P78382 337 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PLGLB1Q02325 96 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LTBQ06643 244 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 RPL18Q07020 188 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PUDPQ08623 228 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 FOXO1Q12778 655 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 POU4F2Q12837 409 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 TOMM20Q15388 145 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 OR7A5Q15622 319 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 INPP5JQ15735 1006 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ZNF239Q16600 458 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 DEFB109BQ30KR1 87 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ZNF766Q5HY98 468 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC35D3Q5M8T2 416 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 AADACL4Q5VUY2 407 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 RNLSQ5VYX0 342 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC6A19Q695T7 634 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CCDC81Q6ZN84 652 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 TMPPEQ6ZT21 453 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CXXC5Q7LFL8 322 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ADCK1Q86TW2 530 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SULF2Q8IWU5 870 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 ZADH2Q8N4Q0 377 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LRRC17Q8N6Y2 441 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LRRC75AQ8NAA5 344 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 FDCSPQ8NFU4 85 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 OR14L1PQ8NHC6 308 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 GGHQ92820 318 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 UBE2FQ969M7 185 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 MIB2Q96AX9 1013 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC25A36Q96CQ1 311 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SCMH1Q96GD3 660 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CRELD1Q96HD1 420 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 SIGLEC12Q96PQ1 595 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 OR5B2Q96R09 309 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 NAA11Q9BSU3 229 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 KATNB1Q9BVA0 655 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CCDC90BQ9GZT6 254 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CCDC86Q9H6F5 360 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CHST11Q9NPF2 352 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 FKBP14Q9NWM8 211 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 CHCHD3Q9NX63 227 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PAQR5Q9NXK6 330 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 GRHPRQ9UBQ7 328 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 WARS2Q9UGM6 360 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 PCDHGA9Q9Y5G4 932 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 IER3IP1Q9Y5U9 82 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
TOPBP1-202ENST00000503338 LOC102725191A0A1B0GVB3 256 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms