RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SORCS2Q96PQ0 1159 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 PANX1Q96RD7 426 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 SORT1Q99523 831 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 DOK1Q99704 481 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 C19orf24Q9BVV8 132 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TAPBPLQ9BX59 468 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ARMC7Q9H6L4 198 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MANSC1Q9H8J5 431 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 EVA1AQ9H8M9 152 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 BCL2L10Q9HD36 194 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MOKQ9UQ07 419 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 IFT52Q9Y366 437 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ATP23Q9Y6H3 246 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ANK2Q01484 3957 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 A0A0G2JPF8 293 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 LOC100289279A0A1B0GTE1 492 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 A0A1W2PR80 420 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 TLDC2A0PJX2 215 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 ZC3H12DA2A288 527 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SMIM23A6NLE4 172 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CLDN24A6NM45 220 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 HNRNPCL2B2RXH8 293 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 HNRNPCL3B7ZW38 293 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 AP3D1O14617 1153 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 FRS3O43559 492 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 HNRNPCL1O60812 293 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 LILRA1O75019 489 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SPAG7O75391 227 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 STAMBPO95630 424 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CPSF4O95639 269 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 C8BP07358 591 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CHRM4P08173 479 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 HNRNPCL4P0DMR1 293 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF16P17020 682 aaPredicted RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 PTNP21246 168 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC1A6P48664 564 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MRPL19P49406 292 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 RNF144AP50876 292 aaPredicted RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CRISP3P54108 245 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC18A1P54219 525 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 DVL1P1P54792 670 aaPredicted RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 UBE2NP61088 152 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 COPZ1P61923 177 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MRPS11P82912 194 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 IFFO1Q0D2I5 559 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SCGB2A2Q13296 93 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 RIN1Q13671 783 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CEACAM7Q14002 265 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MFSD13AQ14CX5 517 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 LARS2Q15031 903 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SYPL1Q16563 259 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MMEL1Q495T6 779 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC9B1Q4ZJI4 515 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 LIN52Q52LA3 116 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 PDCD4Q53EL6 469 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 C1orf140Q5VVS0 124 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 REP15Q6BDI9 236 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 WDR93Q6P2C0 686 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CROCCP2Q86T23 111 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MEX3DQ86XN8 651 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 RNF130Q86XS8 419 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 EPHX4Q8IUS5 362 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 CLEC4FQ8N1N0 589 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 TEX29Q8N6K0 151 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM99Q8N816 258 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 ANKFN1Q8N957 763 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 ADPRHL1Q8NDY3 354 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 OR52P1PQ8NH57 321 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 AGR3Q8TD06 166 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 AENQ8WTP8 325 aaKnown RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 FBXO17Q96EF6 278 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 AURKBQ96GD4 344 aaPredicted RBP5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 KCNS3Q9BQ31 491 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 SPATA9Q9BWV2 254 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 BPESC1Q9GZL8 116 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 C20orf27Q9GZN8 174 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 MS4A5Q9H3V2 200 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 AIG1Q9NVV5 245 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 P2RX2Q9UBL9 471 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 FBXL3Q9UKT7 428 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
LSM3P4-201ENST00000502948 IGHV4-61A0A0C4DH41 118 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC35F4A4IF30 521 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 TRPC5OSA6NMA1 111 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 TCF21O43680 179 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ITM2AO43736 263 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 MGRN1O60291 552 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 KRT33AO76009 404 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 AKR7A3O95154 331 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ALDOCP09972 364 aaKnown RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 OR4A8P0C604 315 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CECR9P0C854 216 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 NR2F1P10589 423 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 PNMTP11086 282 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 IDO1P14902 403 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ETS2P15036 469 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CREB1P16220 341 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF43P17038 809 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms