RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 HIST1H2ABP04908 130 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 ELK1P19419 428 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 SDHAP31040 664 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 NBL1P41271 181 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 PITPNBP48739 271 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 E2F1Q01094 437 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 INSL4Q14641 139 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 ANGPT1Q15389 498 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 CARTPTQ16568 116 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 NDUFAF6Q330K2 333 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 ALG10Q5BKT4 473 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 HIST3H2AQ7L7L0 130 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 SLC29A4Q7RTT9 530 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 NANOGNBQ7Z5D8 188 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 D2HGDHQ8N465 521 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 OR5J2Q8NH18 312 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 TRMT10AQ8TBZ6 339 aaKnown RBP10.94□□□□□ -0.66
NUP54-202ENST00000502850 THAP4Q8WY91 577 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 HIST1H2ACQ93077 130 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 RFT1Q96AA3 541 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 PELI1Q96FA3 418 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 ZNF486Q96H40 463 aaPredicted RBP10.94□□□□□ -0.66
NUP54-202ENST00000502850 NXF5Q9H1B4 397 aaKnown RBP10.94□□□□□ -0.66
NUP54-202ENST00000502850 FKRPQ9H9S5 495 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 ZNF304Q9HCX3 659 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 MMP25Q9NPA2 562 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 RPRD1BQ9NQG5 326 aaKnown RBP10.94□□□□□ -0.66
NUP54-202ENST00000502850 RXFP3Q9NSD7 469 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 C2orf42Q9NWW7 574 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 SEMA5BQ9P283 1151 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 NCDNQ9UBB6 729 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 FBXL4Q9UKA2 621 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 RASD1Q9Y272 281 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 TMEM184BQ9Y519 407 aaPredicted RBP10.94□□□□□ -0.66
NUP54-202ENST00000502850 RNF215Q9Y6U7 377 aa10.94□□□□□ -0.66
NUP54-202ENST00000502850 IGHV1OR21-1A0A087WYE8 117 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 TRBV2A0A0J9YWF9 115 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 CENPXA8MT69 81 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 H3BMH7 237 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 PHYHO14832 338 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 TFECO14948 347 aaPredicted RBP10.93□□□□□ -0.66
NUP54-202ENST00000502850 SLC43A1O75387 559 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 DCNP07585 359 aaKnown RBP10.93□□□□□ -0.66
NUP54-202ENST00000502850 UCHL1P09936 223 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 GLB1P16278 677 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ALAS2P22557 587 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 EDNRAP25101 427 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ACVR1BP36896 505 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 AFF3P51826 1226 aaKnown RBP10.93□□□□□ -0.66
NUP54-202ENST00000502850 RAB25P57735 213 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 P2RY14Q15391 338 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 CD226Q15762 336 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 TP53I3Q53FA7 332 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 YIF1BQ5BJH7 314 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 WDR45BQ5MNZ6 344 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 SNAP47Q5SQN1 464 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ATAD3CQ5T2N8 411 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ZNF57Q68EA5 555 aaPredicted RBP10.93□□□□□ -0.66
NUP54-202ENST00000502850 LEG1Q6P5S2 330 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 SLC16A9Q7RTY1 509 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 SLC35F3Q8IY50 421 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 SPEM1Q8N4L4 309 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 LRRC17Q8N6Y2 441 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 SAMD12Q8N8I0 201 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 C17orf47Q8NEP4 570 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 OR6K6Q8NGW6 343 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 OR2T4Q8NH00 348 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 RPS4Y2Q8TD47 263 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 THRSPQ92748 146 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ADIPOR1Q96A54 375 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 CREB3L1Q96BA8 519 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ARSGQ96EG1 525 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 NMNAT3Q96T66 252 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 DDOQ99489 341 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 FOXQ1Q9C009 403 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 HDHD2Q9H0R4 259 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 MMP28Q9H239 520 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 DDX28Q9NUL7 540 aaKnown RBP10.93□□□□□ -0.66
NUP54-202ENST00000502850 MALT1Q9UDY8 824 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 GNG8Q9UK08 70 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 ADAM18Q9Y3Q7 739 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
NUP54-202ENST00000502850 A0A0G2JK05 382 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 TEX13CA0A0J9YWL9 993 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 A0A1B0GX78 115 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 A0A1W2PRG6 482 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 CPNE3O75131 537 aaKnown RBP10.92□□□□□ -0.66
NUP54-202ENST00000502850 DDAH2O95865 285 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 RENP00797 406 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 MT-ATP6P00846 226 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ASAH2BP0C7U1 165 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 PSKH1P11801 424 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 PGCP20142 388 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 MAPK3P27361 379 aaPredicted RBP10.92□□□□□ -0.66
NUP54-202ENST00000502850 UQCRC1P31930 480 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 THBS2P35442 1172 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 NAA10P41227 235 aaPredicted RBP10.92□□□□□ -0.66
NUP54-202ENST00000502850 KIR2DL3P43628 341 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 CENPAP49450 140 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms