RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 HSD17B12Q53GQ0 312 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SLC35D3Q5M8T2 416 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 FNDC7Q5VTL7 733 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 BICRALQ6AI39 1079 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 LAMTOR1Q6IAA8 161 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 LEG1Q6P5S2 330 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 CBLN3Q6UW01 205 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 MED25Q71SY5 747 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SIAH3Q8IW03 269 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 IZUMO1Q8IYV9 350 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SMRP1Q8NCR6 262 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 OR51Q1Q8NH59 317 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 RNF166Q96A37 237 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 TCTN2Q96GX1 697 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 Q96M85 177 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 MOGAT1Q96PD6 335 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 TSSK2Q96PF2 358 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 GPX7Q96SL4 187 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 GFI1Q99684 422 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 KLHDC3Q9BQ90 382 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SLC25A18Q9H1K4 315 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 NOX4Q9NPH5 578 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ANKRD10Q9NXR5 420 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 BLACEA4D250 179 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ACOD1A6NK06 481 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ELOA3DA6NLF2 546 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 CENPBD1B2RD01 187 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 CHURC1-FNTBB4DL54 471 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 BLOC1S5-TXNDC5H3BN57 136 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 AKR7A2O43488 359 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF780AO75290 641 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 GATBO75879 557 aaKnown RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 CD1AP06126 327 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 PROS1P07225 676 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 FNTBP49356 437 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 BLKP51451 505 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 MMP15P51511 669 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 CCR4P51679 360 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 HSD17B7P56937 341 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SNRPD2P62316 118 aaKnown RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 GALK2Q01415 458 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 FCN2Q15485 313 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 BTBD16Q32M84 506 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ELOA3BQ3SY89 546 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 CCDC58Q4VC31 144 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 HACD4Q5VWC8 232 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 MTFR2Q6P444 385 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 APOOLQ6UXV4 268 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 PRSS45Q7RTY3 260 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 OVCH1Q7RTY7 1134 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 TOMM5Q8N4H5 51 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ELOA3Q8NG57 546 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 RPS4Y2Q8TD47 263 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ADAMTS18Q8TE60 1221 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 RGP1Q92546 391 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 SCMH1Q96GD3 660 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF578Q96N58 590 aaPredicted RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF285Q96NJ3 590 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 ALG12Q9BV10 488 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 GTPBP2Q9BX10 602 aaKnown RBP9□□□□□ -0.97
CLIP1-204ENST00000501271 SLC19A3Q9BZV2 496 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 AUNIPQ9H7T9 357 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 SPATA2Q9UM82 520 aa9□□□□□ -0.97
CLIP1-204ENST00000501271 C7orf66A4D0T2 115 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 C17orf105B2RV13 164 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 GLCEO94923 617 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 MAOBP27338 520 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 GIFP27352 417 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 FASLGP48023 281 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 PRPS1P60891 318 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 EGR4Q05215 589 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 SKP2Q13309 424 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF74Q16587 644 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ISXQ2M1V0 245 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 FAM205BPQ63HN1 556 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 WBP2NLQ6ICG8 309 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 UNQ9370/PRO34162Q6UXP9 181 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 FAM122BQ7Z309 247 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 PLCZ1Q86YW0 608 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 LRRC75AQ8NAA5 344 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF511Q8NB15 262 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 CLIP3Q96DZ5 547 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 YIPF2Q9BWQ6 316 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 GON7Q9BXV9 100 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 SPRTNQ9H040 489 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 DPAGT1Q9H3H5 408 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 GHITMQ9H3K2 345 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 KLHDC2Q9Y2U9 406 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 PCDHGA9Q9Y5G4 932 aaKnown RBP8.99□□□□□ -0.97
CLIP1-204ENST00000501271 IGHV5-51A0A0C4DH38 117 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ZFPL1O95159 310 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 TCRBP04435 133 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 WNT1P04628 370 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 ANKRD34CP0C6C1 535 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 UBL4AP11441 157 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 SRMP19623 302 aa8.99□□□□□ -0.97
CLIP1-204ENST00000501271 CD1CP29017 333 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms