RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 ZNF583Q96ND8 569 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 TMEM43Q9BTV4 400 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 POLR2J2Q9GZM3 115 aaKnown RBP9.3□□□□□ -0.92
FXR1-222ENST00000498658 FAM107BQ9H098 131 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 POLR2J3Q9H1A7 115 aaKnown RBP9.3□□□□□ -0.92
FXR1-222ENST00000498658 ESRP2Q9H6T0 727 aaKnown RBP9.3□□□□□ -0.92
FXR1-222ENST00000498658 PLEKHF2Q9H8W4 249 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 TAS2R16Q9NYV7 291 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 MALT1Q9UDY8 824 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 PRSS50Q9UI38 385 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 ITGB1BP2Q9UKP3 347 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 CORINQ9Y5Q5 1042 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
FXR1-222ENST00000498658 CCDC168Q8NDH2 2452 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 CIB4A0PJX0 185 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 ELOVL7A1L3X0 281 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 TRAPPC13A5PLN9 417 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 FTCDNL1E5RQL4 147 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 M0R3H8 397 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 AKAP8O43823 692 aaKnown RBP9.29□□□□□ -0.92
FXR1-222ENST00000498658 FZD7O75084 574 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 KRT33AO76009 404 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 MT-ATP6P00846 226 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 THBDP07204 575 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 ZNF43P17038 809 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 CD247P20963 164 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 IGHV1-2P23083 117 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 PAX7P23759 505 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 IFNA8P32881 189 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 CDH12P55289 794 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 FAPQ12884 760 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 ENTPD8Q5MY95 495 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 CREB3L2Q70SY1 520 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 H1FNTQ75WM6 255 aaPredicted RBP9.29□□□□□ -0.92
FXR1-222ENST00000498658 AAED1Q7RTV5 226 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 COMTD1Q86VU5 262 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 POU5F2Q8N7G0 328 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 SCAIQ8N9R8 606 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 ADPRHL1Q8NDY3 354 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 C1orf162Q8NEQ5 155 aaPredicted RBP9.29□□□□□ -0.92
FXR1-222ENST00000498658 GPR32P1Q8NGA4 272 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 OR6T1Q8NGN1 323 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 TAMM41Q96BW9 452 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 KTI12Q96EK9 354 aaPredicted RBP9.29□□□□□ -0.92
FXR1-222ENST00000498658 OXGR1Q96P68 337 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 FOXC2Q99958 501 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 PTDSS2Q9BVG9 487 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 ASPNQ9BXN1 380 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
FXR1-222ENST00000498658 SLC19A3Q9BZV2 496 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 SH3GLB1Q9Y371 365 aa9.29□□□□□ -0.92
FXR1-222ENST00000498658 HRNRQ86YZ3 2850 aaPredicted RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 AKAP9Q99996 3911 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 OR5H1A6NKK0 313 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 CCT8L1PA6NM43 557 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 KLF4O43474 513 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 TPST2O60704 377 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 RAMP1O60894 148 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 LYZL6O75951 148 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 THRBP10828 461 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 NQO1P15559 274 aaKnown RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 DRD4P21917 467 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 MPGP29372 298 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 HOXC12P31275 282 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 KDELR2P33947 212 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 NUDT2P50583 147 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 P2RY4P51582 365 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 IST1P53990 364 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 GNGT1P63211 74 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 C1DQ13901 141 aaKnown RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 PPA1Q15181 289 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 TAB1Q15750 504 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 TTC33Q6PID6 262 aaPredicted RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 LINC00114Q6XXX2 140 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 SPNS3Q6ZMD2 512 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 SLC15A3Q8IY34 581 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 MICU2Q8IYU8 434 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 C17orf78Q8N4C9 275 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 ZNF433Q8N7K0 673 aaPredicted RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 VANGL1Q8TAA9 524 aaPredicted RBP9.28□□□□□ -0.92
FXR1-222ENST00000498658 ADAMTS16Q8TE57 1224 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 PIGTQ969N2 578 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 PLPPR2Q96GM1 343 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 MUS81Q96NY9 551 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 LRRC37BQ96QE4 947 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 ALPK1Q96QP1 1244 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 MYLK2Q9H1R3 596 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 SLCO5A1Q9H2Y9 848 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 ALG2Q9H553 416 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 RCE1Q9Y256 329 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 PLEKHA6Q9Y2H5 1048 aa9.28□□□□□ -0.92
FXR1-222ENST00000498658 IGKV1D-42A0A075B6H8 117 aa9.27□□□□□ -0.93
FXR1-222ENST00000498658 CPSF4LA6NMK7 179 aaKnown RBP9.27□□□□□ -0.93
FXR1-222ENST00000498658 GSTA4O15217 222 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms