RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PPP1R36Q96LQ0 422 aa12.71□□□□□ -0.37
TRAF4-212ENST00000498540 SLC35A5Q9BS91 424 aa12.71□□□□□ -0.37
TRAF4-212ENST00000498540 TPK1Q9H3S4 243 aa12.71□□□□□ -0.37
TRAF4-212ENST00000498540 DYNLRB1Q9NP97 96 aa12.71□□□□□ -0.37
TRAF4-212ENST00000498540 FBXO9Q9UK97 447 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-212ENST00000498540 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.37
TRAF4-212ENST00000498540 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 IGHV2OR16-5A0A0B4J2B6 119 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 PRSS51A0A1B0GVH4 220 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 KCNAB3O43448 404 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 FRS3O43559 492 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 SPAG7O75391 227 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 RGS9O75916 674 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-212ENST00000498540 EGR1P18146 543 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 PAX7P23759 505 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 CXCR1P25024 350 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 CHI3L1P36222 383 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-212ENST00000498540 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
TRAF4-212ENST00000498540 RNF130Q86XS8 419 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 EPHX4Q8IUS5 362 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 CKAP2Q8WWK9 683 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-212ENST00000498540 TRNT1Q96Q11 434 aaKnown RBP12.7□□□□□ -0.38
TRAF4-212ENST00000498540 DPY30Q9C005 99 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 RLIMQ9NVW2 624 aa12.7□□□□□ -0.38
TRAF4-212ENST00000498540 A0A0A6YYJ9 748 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 OR6C65A6NJZ3 312 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 SLCO1B7G3V0H7 640 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 ADRA2AP08913 450 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 GKN3PP0CG01 181 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 UQCRBP14927 111 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 IL7RP16871 459 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 SERPINB5P36952 375 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 ACTG1P63261 375 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 IL1RL1Q01638 556 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 CASP8Q14790 479 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 PDCD2Q16342 344 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-212ENST00000498540 SPANXN4Q5MJ08 99 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 PRAMEF8Q5VWM4 474 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 PRAMEF7Q5VXH5 474 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 TCP10LQ8TDR4 215 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 TAPBPLQ9BX59 468 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 AKTIPQ9H8T0 292 aa12.69□□□□□ -0.38
TRAF4-212ENST00000498540 TLDC2A0PJX2 215 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 TMEM229AB2RXF0 380 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 B4DSR2 109 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 FAM157AC9JC47 383 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 VAMP5O95183 116 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 CBR1P16152 277 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 PCMT1P22061 227 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 COMPP49747 757 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 SH3BGRP55822 239 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 ARF1P84077 181 aaKnown RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 NPRL3Q12980 569 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 GSTA3Q16772 222 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 KRT80Q6KB66 452 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 LRRC74BQ6ZQY2 392 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 CARM1Q86X55 608 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 KDM8Q8N371 416 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 CADM2Q8N3J6 435 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 VPS37AQ8NEZ2 397 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 TESCQ96BS2 214 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 NARFLQ9H6Q4 476 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 LPAR2Q9HBW0 351 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 NOX3Q9HBY0 568 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 MOV10Q9HCE1 1003 aaKnown RBP12.68□□□□□ -0.38
TRAF4-212ENST00000498540 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
TRAF4-212ENST00000498540 CDHR4A6H8M9 788 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 A8MVM7 634 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
TRAF4-212ENST00000498540 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-212ENST00000498540 CLDN17P56750 224 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 DAG1Q14118 895 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 GNA13Q14344 377 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 MAPK11Q15759 364 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 COX20Q5RI15 118 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF836Q6ZNA1 936 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 MDP1Q86V88 176 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 VRK2Q86Y07 508 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 C3orf56Q8N813 242 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 CLDND2Q8NHS1 167 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 TMEM186Q96B77 213 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF837Q96EG3 531 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms