RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRBV4-1A0A0J9YWV2 114 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 HTR3EA5X5Y0 456 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 IFI30P13284 250 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 AGFG1P52594 562 aaKnown RBP17.91■□□□□ 0.46
CTSD-206ENST00000497544 NUP107P57740 925 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 ZNF239Q16600 458 aaKnown RBP17.91■□□□□ 0.46
CTSD-206ENST00000497544 PLXDC2Q6UX71 529 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 MBOAT2Q6ZWT7 520 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 FJX1Q86VR8 437 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 FNDC9Q8TBE3 224 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 PYDC1Q8WXC3 89 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 SGTBQ96EQ0 304 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 TM9SF2Q99805 663 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 TTYH2Q9BSA4 534 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 KRCC1Q9NPI7 259 aaPredicted RBP17.91■□□□□ 0.46
CTSD-206ENST00000497544 CLCF1Q9UBD9 225 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 DNAJB9Q9UBS3 223 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 MEMO1Q9Y316 297 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 SAMHD1Q9Y3Z3 626 aaKnown RBP17.91■□□□□ 0.46
CTSD-206ENST00000497544 ABCA2Q9BZC7 2435 aa17.91■□□□□ 0.46
CTSD-206ENST00000497544 SPG11Q96JI7 2443 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 CCDC168Q8NDH2 2452 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 IGHV3-15A0A0B4J1V0 119 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 SH3PXD2BA1X283 911 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 DEAF1O75398 565 aaPredicted RBP17.9■□□□□ 0.46
CTSD-206ENST00000497544 AKR7A3O95154 331 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 TGM6O95932 706 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 MT-ATP6P00846 226 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 IL2RAP01589 272 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 BGLAPP02818 100 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 HIST1H2ABP04908 130 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 FCGR2AP12318 317 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 FASP25445 335 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 PRKCDQ05655 676 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 LTBQ06643 244 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 PMPCAQ10713 525 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 EXOC3L2Q2M3D2 409 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 PAQR6Q6TCH4 344 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 FCRLAQ7L513 359 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 HIST3H2AQ7L7L0 130 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 MCEMP1Q8IX19 187 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 NRMQ8IXM6 262 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 SLC43A2Q8N370 569 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 RPRMLQ8N4K4 120 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 OR4K5Q8NGD3 323 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 STMN2Q93045 179 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 HIST1H2ACQ93077 130 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 ASPNQ9BXN1 380 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 NANSQ9NR45 359 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 LYVE1Q9Y5Y7 322 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 U3KQV3 271 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 DOCK7Q96N67 2140 aa17.9■□□□□ 0.46
CTSD-206ENST00000497544 KDM4EB2RXH2 506 aaPredicted RBP17.89■□□□□ 0.45
CTSD-206ENST00000497544 FTCDNL1E5RQL4 147 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 CLOCKO15516 846 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 LRRTM2O43300 516 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 PIP5K1CO60331 668 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 ENTPD5O75356 428 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 OR7A10O76100 309 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 AQP8O94778 261 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 IGF2P01344 180 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 GLI4P10075 376 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 FCGR1AP12314 374 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 FUT1P19526 365 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 GRPRP30550 384 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 TIMP3P35625 211 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 IFNGR2P38484 337 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 PER3P56645 1201 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 LSM11P83369 360 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSD-206ENST00000497544 PPP1R8Q12972 351 aaKnown RBP17.89■□□□□ 0.45
CTSD-206ENST00000497544 GK3PQ14409 553 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 ZNF74Q16587 644 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 OTUD3Q5T2D3 398 aaPredicted RBP17.89■□□□□ 0.45
CTSD-206ENST00000497544 TMEM225Q6GV28 225 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 LINC00471Q8N535 108 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 TMEM99Q8N816 258 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 PIGXQ8TBF5 258 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 BPIFA2Q96DR5 249 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 MOGAT1Q96PD6 335 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 C20orf141Q9NUB4 165 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 CORINQ9Y5Q5 1042 aa17.89■□□□□ 0.45
CTSD-206ENST00000497544 MBD3L4A6NDZ8 208 aaPredicted RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 MBD3L3A6NE82 208 aaPredicted RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 MBD3L5A6NJ08 208 aaPredicted RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 LRRN3E7EW58 273 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 SMAD9O15198 467 aaKnown RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 OR10H3O60404 316 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 E2F6O75461 281 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 CCNB2O95067 398 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 ARHGDIAP52565 204 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 CTBP2P56545 445 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 RNPS1Q15287 305 aaKnown RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 SEC23BQ15437 767 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 OR2A2Q6IF42 318 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 MTFR2Q6P444 385 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 SEM1Q6ZVN7 128 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 H1FNTQ75WM6 255 aaPredicted RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 C9orf106Q8NAJ2 232 aa17.88■□□□□ 0.45
CTSD-206ENST00000497544 MBD3L2Q8NHZ7 208 aaPredicted RBP17.88■□□□□ 0.45
CTSD-206ENST00000497544 RND1Q92730 232 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms