RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LRRC1Q9BTT6 524 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 OR51M1Q9H341 326 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NHEJ1Q9H9Q4 299 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NMUR1Q9HB89 426 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 TMEM165Q9HC07 324 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 PRSS16Q9NQE7 514 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 OCIAD1Q9NX40 245 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 UXTQ9UBK9 157 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 EIF3KQ9UBQ5 218 aaKnown RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 DMRT1Q9Y5R6 373 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ITGB4P16144 1822 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NSG1A0A0A6YYJ2 146 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 IGHV4-61A0A0C4DH41 118 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 IGHV2-70DA0A0C4DH43 119 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 A0A1W2PRD5 423 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF724A8MTY0 619 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ARHGEF33A8MVX0 844 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 F8VZ95 297 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 AIM2O14862 343 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 GMDSO60547 372 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 SCN2BO60939 215 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ETHE1O95571 254 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 GLUD1P00367 558 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 IGLV2-14P01704 120 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 IGHV4-59P01825 116 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 NGFRP08138 427 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 IGHV4-38-2P0DP08 117 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 GATA1P15976 413 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 UGT1A4P22310 534 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 NSG1P42857 185 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 PTH2RP49190 550 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 POU3F4P49335 361 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 GLUD2P49448 558 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ARHGDIBP52566 201 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 XGP55808 180 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ERVK-25P63136 954 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 TRAF2Q12933 501 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 HLFQ16534 295 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 HLA-BQ31612 363 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 SLC25A47Q6Q0C1 308 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ADAMTSL5Q6ZMM2 481 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 STAC2Q6ZMT1 411 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF600Q6ZNG1 722 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 MOB2Q70IA6 237 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 YTHDF3Q7Z739 585 aaKnown RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 SLC47A2Q86VL8 602 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 CYP4Z1Q86W10 505 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 APRG1Q8IVJ8 170 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 KRT222Q8N1A0 295 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 MARVELD2Q8N4S9 558 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 CSNK1A1LQ8N752 337 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 RPLP0P6Q8NHW5 317 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 BIRC7Q96CA5 298 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 SH3GL1Q99961 368 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 RBM4BQ9BQ04 359 aaKnown RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 CHID1Q9BWS9 393 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 UPF3BQ9BZI7 483 aaKnown RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 RBM38Q9H0Z9 239 aaKnown RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 PSTPIP2Q9H939 334 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 UCK1Q9HA47 277 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 PLEKHA3Q9HB20 300 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 INTS9Q9NV88 658 aaKnown RBP5.17□□□□□ -1.58
BRCA1-224ENST00000497488 PCDHGB1Q9Y5G3 927 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 USP16Q9Y5T5 823 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 TUBGCP6Q96RT7 1819 aa5.17□□□□□ -1.58
BRCA1-224ENST00000497488 C5P01031 1676 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ADAMTS7Q9UKP4 1686 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 MRC1P22897 1456 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 SRRM3A6NNA2 597 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 LRRIQ3A6PVS8 624 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 C1QTNF3-AMACRE9PGA6 284 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 H3BMQ9 156 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 NDUFAB1O14561 156 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 OR10H3O60404 316 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 PFKFB2O60825 505 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 RAMP1O60894 148 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 RPLP0P05388 317 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ACAA1P09110 424 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 POLR2EP19388 210 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 PMCHP20382 165 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 EDNRAP25101 427 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 PRKAR2BP31323 418 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 CEACAM8P31997 349 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 GPR183P32249 361 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 GNPDA1P46926 289 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 CX3CR1P49238 355 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 PMS2P3Q13401 168 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 RBMS2Q15434 407 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 SLC22A6Q4U2R8 563 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 KLHL22Q53GT1 634 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 DCST2Q5T1A1 773 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 CAPRIN2Q6IMN6 1127 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 SLC25A48Q6ZT89 311 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF627Q7L945 461 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 SLC26A11Q86WA9 606 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 NUDCD3Q8IVD9 361 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 NELFCDQ8IXH7 590 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 C12orf56Q8IXR9 622 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 JAGN1Q8N5M9 183 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms