RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 TAMM41Q96BW9 452 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 SLC25A36Q96CQ1 311 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 ZNF583Q96ND8 569 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 ZNF385AQ96PM9 386 aaKnown RBP16.47■□□□□ 0.23
RPN1-208ENST00000497415 MCHR1Q99705 422 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 SLC7A10Q9NS82 523 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 BEX4Q9NWD9 120 aaPredicted RBP16.47■□□□□ 0.23
RPN1-208ENST00000497415 TAS2R16Q9NYV7 291 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 ROS1P08922 2347 aa16.47■□□□□ 0.23
RPN1-208ENST00000497415 ITPR3Q14573 2671 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 TRAV36DV7A0A075B6V5 113 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 OR5H1A6NKK0 313 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 M0R3H8 397 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 CCDC22O60826 627 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 PLAUP00749 431 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 ITGA5P08648 1049 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 CDH12P55289 794 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 FOXG1P55316 489 aaPredicted RBP16.46■□□□□ 0.23
RPN1-208ENST00000497415 TSPO2Q5TGU0 170 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 ERICH5Q6P6B1 374 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 ZNF613Q6PF04 617 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 LINC00114Q6XXX2 140 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 C20orf204Q6ZNR8 217 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 AAED1Q7RTV5 226 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 GPAT4Q86UL3 456 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 OR4D11Q8NGI4 311 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 OR6T1Q8NGN1 323 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 RASSF5Q8WWW0 418 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 MUS81Q96NY9 551 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 AMBRA1Q9C0C7 1298 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 UBTD1Q9HAC8 227 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 SELENONQ9NZV5 590 aa16.46■□□□□ 0.23
RPN1-208ENST00000497415 TEP1Q99973 2627 aaKnown RBP16.45■□□□□ 0.22
RPN1-208ENST00000497415 PPA1Q15181 289 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 GABRA6Q16445 453 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 ALKBH2Q6NS38 261 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 ADAM5Q6NVV9 412 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 EPHX4Q8IUS5 362 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 POU5F2Q8N7G0 328 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 POMGNT2Q8NAT1 580 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 SLC26A7Q8TE54 656 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 MUCL1Q96DR8 90 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 TMEM43Q9BTV4 400 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 ESRP2Q9H6T0 727 aaKnown RBP16.45■□□□□ 0.22
RPN1-208ENST00000497415 UPB1Q9UBR1 384 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 USP22Q9UPT9 525 aa16.45■□□□□ 0.22
RPN1-208ENST00000497415 CIB4A0PJX0 185 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 AIM2O14862 343 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 RAD51DO75771 328 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 COX4I1P13073 169 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 GTF2E2P29084 291 aaKnown RBP16.44■□□□□ 0.22
RPN1-208ENST00000497415 GRPRP30550 384 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 MFSD13AQ14CX5 517 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 STK11Q15831 433 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 ENTPD8Q5MY95 495 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 OR7E24Q6IFN5 339 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 RBM45Q8IUH3 476 aaKnown RBP16.44■□□□□ 0.22
RPN1-208ENST00000497415 P3H2Q8IVL5 708 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 ADPRHL1Q8NDY3 354 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 IGFBPL1Q8WX77 278 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 PIGTQ969N2 578 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 RCN3Q96D15 328 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 SLC41A3Q96GZ6 507 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 OXGR1Q96P68 337 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 EPYCQ99645 322 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 PCDHAC1Q9H158 963 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 SLCO5A1Q9H2Y9 848 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 B3GAT1Q9P2W7 334 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 SEC14L4Q9UDX3 406 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 B3GALT5Q9Y2C3 310 aa16.44■□□□□ 0.22
RPN1-208ENST00000497415 CADP27708 2225 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 LOC102725191A0A1B0GVB3 256 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 CCT8L1PA6NM43 557 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 FAM220BPB1ANY3 271 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 M0R082 166 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 CHP2O43745 196 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 LYPD3O95274 346 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 BGLAPP02818 100 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 THY1P04216 161 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 SEC24CP53992 1094 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 LTBQ06643 244 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 H1FNTQ75WM6 255 aaPredicted RBP16.43■□□□□ 0.22
RPN1-208ENST00000497415 SPATA21Q7Z572 469 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 TREML1Q86YW5 311 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 TGIF2LYQ8IUE0 185 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 KDM8Q8N371 416 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 C1orf162Q8NEQ5 155 aaPredicted RBP16.43■□□□□ 0.22
RPN1-208ENST00000497415 LILRB1Q8NHL6 650 aaPredicted RBP16.43■□□□□ 0.22
RPN1-208ENST00000497415 ZNF417Q8TAU3 575 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 RNF217Q8TC41 542 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 BOD1Q96IK1 185 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 ZNF587Q96SQ5 575 aaPredicted RBP16.43■□□□□ 0.22
RPN1-208ENST00000497415 ELAC2Q9BQ52 826 aaKnown RBP16.43■□□□□ 0.22
RPN1-208ENST00000497415 NPAP1Q9NZP6 1156 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 SLC25A15Q9Y619 301 aa16.43■□□□□ 0.22
RPN1-208ENST00000497415 OR6C65A6NJZ3 312 aa16.42■□□□□ 0.22
RPN1-208ENST00000497415 CPSF4LA6NMK7 179 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms