RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SCD5Q86SK9 330 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 PARGQ86W56 976 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 TGIF2LYQ8IUE0 185 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 STHQ8IWL8 128 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 C12orf29Q8N999 325 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 DENND6BQ8NEG7 585 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 BTN2A3PQ96KV6 586 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 NEUROG2Q9H2A3 272 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 TSPY26PQ9H489 355 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 ANKMY1Q9P2S6 941 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 ERVK-18Q9QC07 812 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 SPASTQ9UBP0 616 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 DOCK4Q8N1I0 1966 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 CHD5Q8TDI0 1954 aa3.43□□□□□ -1.86
MDM2-220ENST00000496959 COL27A1Q8IZC6 1860 aaPredicted RBP3.43□□□□□ -1.86
MDM2-220ENST00000496959 SPTAN1Q13813 2472 aaKnown RBP3.43□□□□□ -1.86
MDM2-220ENST00000496959 VPS37CA5D8V6 355 aaPredicted RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 C11orf98E9PRG8 122 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 F5H5T6 163 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 CACNB4O00305 520 aaPredicted RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 NVLO15381 856 aaKnown RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 TNFSF15O95150 251 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 YEATS4O95619 227 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 HLA-DRAP01903 254 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 SFTPBP07988 381 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 PAEPP09466 180 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 CCDC166P0CW27 439 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 VDRP11473 427 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ZNF18P17022 549 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 VCLP18206 1134 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 CD70P32970 193 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 HERV-K104P63124 156 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 RPS21P63220 83 aaKnown RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 KRT83P78385 493 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ADIGQ0VDE8 80 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 EXOSC7Q15024 291 aaKnown RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 TYSND1Q2T9J0 566 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ATL3Q6DD88 541 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ATRAIDQ6UW56 229 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 HORMAD1Q86X24 394 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 NELFCDQ8IXH7 590 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 MKXQ8IYA7 352 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ATP6V0D2Q8N8Y2 350 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 Q8N9L7 120 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 FBXL13Q8NEE6 735 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 CCDC112Q8NEF3 446 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 FNDC8Q8TC99 324 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 RAB7BQ96AH8 199 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 HSFY1Q96LI6 401 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ZNF396Q96N95 335 aaPredicted RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 ZNF184Q99676 751 aaPredicted RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 CALN1Q9BXU9 219 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 ULBP1Q9BZM6 244 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 DCLRE1BQ9H816 532 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 DMAC2Q9NW81 257 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 FOXA2Q9Y261 457 aaPredicted RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 SLCO1B1Q9Y6L6 691 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 TLN1Q9Y490 2541 aaKnown RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 LRP4O75096 1905 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 CREBBPQ92793 2442 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
MDM2-220ENST00000496959 LOC400499M0QZD8 3231 aa3.42□□□□□ -1.86
MDM2-220ENST00000496959 HECTD1Q9ULT8 2610 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 A0A0U1RQK1 487 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 SPTY2D1-AS1A0A0U1RR47 76 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 A4D1N5 150 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 TMEM110-MUSTN1A8MSY1 372 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 B4DXG7 233 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 D6RAR5 112 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 AQP9O43315 295 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 SDC3O75056 442 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 CSF2P04141 144 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 EPB41P11171 864 aaKnown RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 MAT2AP31153 395 aaKnown RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 CASP4P49662 377 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 EFNA3P52797 238 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 PLK1P53350 603 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 DAOAP59103 153 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 ELOCQ15369 112 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 GOLGA7BQ2TAP0 167 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 FAM133BQ5BKY9 247 aaKnown RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 ZCCHC12Q6PEW1 402 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 EFL1Q7Z2Z2 1120 aaKnown RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 GKN2Q86XP6 184 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 PYROXD2Q8N2H3 581 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 STK40Q8N2I9 435 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 SLC25A45Q8N413 288 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 ARL10Q8N8L6 244 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 OR52J3Q8NH60 311 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 GOT1L1Q8NHS2 421 aaPredicted RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 DPH7Q9BTV6 452 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 EHD1Q9H4M9 534 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 COPS7BQ9H9Q2 264 aaPredicted RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 CISHQ9NSE2 258 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 SLC2A6Q9UGQ3 507 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 HMGXB4Q9UGU5 601 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 TRAF3IP3Q9Y228 551 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 HS3ST2Q9Y278 367 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms