RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 CLIC1O00299 241 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 POLR3GO15318 223 aaPredicted RBP11.33□□□□□ -0.6
FN1-226ENST00000496542 CD5LO43866 347 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 NPIPB7O75200 414 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 AHSA1O95433 338 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 LGI1O95970 557 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 WNT11O96014 354 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 SELENOPP49908 381 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 P2RY4P51582 365 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 FADDQ13158 208 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 RAB35Q15286 201 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 RGNQ15493 299 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 ZNF544Q6NX49 715 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 NIPAL3Q6P499 406 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 ABHD12BQ7Z5M8 362 aaPredicted RBP11.33□□□□□ -0.6
FN1-226ENST00000496542 GOLGA6L1Q8N7Z2 621 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 SLC25A36Q96CQ1 311 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 MDFIQ99750 246 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 PIF1Q9H611 641 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 YAE1D1Q9NRH1 226 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 PRDM4Q9UKN5 801 aa11.33□□□□□ -0.6
FN1-226ENST00000496542 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
FN1-226ENST00000496542 NR5A2O00482 541 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 VAMP5O95183 116 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 GTF2E2P29084 291 aaKnown RBP11.32□□□□□ -0.6
FN1-226ENST00000496542 RPS5P46782 204 aaKnown RBP11.32□□□□□ -0.6
FN1-226ENST00000496542 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
FN1-226ENST00000496542 CREB3L2Q70SY1 520 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 ZNF525Q8N782 197 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 OR1K1Q8NGR3 316 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 STK35Q8TDR2 534 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 TCF7L2Q9NQB0 619 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 MOKQ9UQ07 419 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
FN1-226ENST00000496542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.31□□□□□ -0.6
FN1-226ENST00000496542 YLPM1P49750 1951 aaKnown RBP11.31□□□□□ -0.6
FN1-226ENST00000496542 H7C417 338 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 GPRIN2O60269 458 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 UPK3AO75631 287 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 PNMTP11086 282 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 BMP2P12643 396 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 HOXB9P17482 250 aaPredicted RBP11.31□□□□□ -0.6
FN1-226ENST00000496542 DSCR9P59020 149 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
FN1-226ENST00000496542 CHRNB3Q05901 458 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 TBRG1Q3YBR2 411 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 MSRB3Q8IXL7 192 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 KDM8Q8N371 416 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 NFKBIDQ8NI38 313 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 LRRC8CQ8TDW0 803 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
FN1-226ENST00000496542 C7orf26Q96N11 449 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 SLCO1B3Q9NPD5 702 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 OBP2BQ9NPH6 170 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 SLC25A37Q9NYZ2 338 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 FBN1P35555 2871 aaKnown RBP11.31□□□□□ -0.6
FN1-226ENST00000496542 MALRD1Q5VYJ5 2156 aa11.31□□□□□ -0.6
FN1-226ENST00000496542 A0A096LPE4 126 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 A0A1W2PPZ6 126 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 OR6C65A6NJZ3 312 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 FTCDNL1E5RQL4 147 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
FN1-226ENST00000496542 ARAFP10398 606 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 BMP4P12644 408 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 ETS2P15036 469 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 HTR2AP28223 471 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
FN1-226ENST00000496542 MRPL19P49406 292 aaKnown RBP11.3□□□□□ -0.6
FN1-226ENST00000496542 CLDN17P56750 224 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 TUBA1BP68363 451 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 TUBA4AP68366 448 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 EGR4Q05215 589 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 C1QTNF12Q5T7M4 302 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 AGBL2Q5U5Z8 902 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 HMBOX1Q6NT76 420 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 TUBA1AQ71U36 451 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 LINGO2Q7L985 606 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 COMTD1Q86VU5 262 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 FUNDC1Q8IVP5 155 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 FAM168AQ92567 244 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 SLC35B4Q969S0 331 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 SPDL1Q96EA4 605 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 SLC38A2Q96QD8 506 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 351.8 ms