RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 Q96MF0 132 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 MUS81Q96NY9 551 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 CGREF1Q99674 301 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 PTDSS2Q9BVG9 487 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 SLC7A10Q9NS82 523 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 LAMP3Q9UQV4 416 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 AMDHD2Q9Y303 409 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 MAGED1Q9Y5V3 778 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-213ENST00000496347 HEATR1Q9H583 2144 aaKnown RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 A0A1B0GWA3 101 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 ABCD4O14678 606 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 OR2T1O43869 369 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 DANCRP0C864 163 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 AQP1P29972 269 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 ATP5J2P56134 94 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 PCBP3P57721 371 aaKnown RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 EGR4Q05215 589 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 GABRA6Q16445 453 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 RUNDC3AQ59EK9 446 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 FAM69AQ5T7M9 428 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 TMEM225Q6GV28 225 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 ULK3Q6PHR2 472 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 KLHL24Q6TFL4 600 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 NET1Q7Z628 596 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 RANBP3LQ86VV4 465 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 ZIC4Q8N9L1 334 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 OR52N5Q8NH56 324 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 SMAP2Q8WU79 429 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 SLC38A4Q969I6 547 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 ZNF385AQ96PM9 386 aaKnown RBP13.82□□□□□ -0.2
HDAC4-213ENST00000496347 BDH2Q9BUT1 245 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 RCE1Q9Y256 329 aa13.82□□□□□ -0.2
HDAC4-213ENST00000496347 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 ZNF587BE7ETH6 402 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 OVOL3O00110 214 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 FMO6PO60774 539 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 SOD3P08294 240 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 TROVE2P10155 538 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 MTPNP58546 118 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 NFYCQ13952 458 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 DTX2Q86UW9 622 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 PTOV1Q86YD1 416 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 ADPRHL1Q8NDY3 354 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 KTI12Q96EK9 354 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 BOD1Q96IK1 185 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 RSPO3Q9BXY4 272 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 GRIP2Q9C0E4 1043 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 B3GALT5Q9Y2C3 310 aa13.81□□□□□ -0.2
HDAC4-213ENST00000496347 FN1P02751 2386 aaKnown RBP13.81□□□□□ -0.2
HDAC4-213ENST00000496347 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 TRAV36DV7A0A075B6V5 113 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 A0A0B4J2E0 115 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 A0A1B0GX12 115 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 AIM2O14862 343 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 TPST1O60507 370 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 MFN2O95140 757 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 CD40P25942 277 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 PCGF2P35227 344 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 SH3BGRP55822 239 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 MFSD13AQ14CX5 517 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 PGGHGQ32M88 737 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 GLIPR1L2Q4G1C9 344 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 COQ5Q5HYK3 327 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 OR6S1Q8NH40 331 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 GTPBP3Q969Y2 492 aaKnown RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 SLC47A1Q96FL8 570 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 ALKBH3Q96Q83 286 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 EPYCQ99645 322 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 TMEM120AQ9BXJ8 343 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 ALG2Q9H553 416 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 KAT8Q9H7Z6 458 aaKnown RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 MOV10Q9HCE1 1003 aaKnown RBP13.8□□□□□ -0.2
HDAC4-213ENST00000496347 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 KLHL14Q9P2G3 628 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 CORINQ9Y5Q5 1042 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 ABCA2Q9BZC7 2435 aa13.8□□□□□ -0.2
HDAC4-213ENST00000496347 A0A087WUJ7 227 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 H7C1Q1 480 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 AKAP8O43823 692 aaKnown RBP13.79□□□□□ -0.2
HDAC4-213ENST00000496347 KRT33AO76009 404 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 WNT11O96014 354 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 HEXAP06865 529 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 C8BP07358 591 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 PAX7P23759 505 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 ZNF83P51522 516 aa13.79□□□□□ -0.2
HDAC4-213ENST00000496347 FOXG1P55316 489 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms