RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 OVCH1Q7RTY7 1134 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 SLITRK4Q8IW52 837 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 OR2T4Q8NH00 348 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 OR56B4Q8NH76 319 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 MOSPD2Q8NHP6 518 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 PHOSPHO2Q8TCD6 241 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 TTC9Q92623 222 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 SORCS2Q96PQ0 1159 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 LMF1Q96S06 567 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 LIN7BQ9HAP6 207 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 CPNE7Q9UBL6 633 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 RPS6KB2Q9UBS0 482 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 IFITM5A6NNB3 132 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 EGFP01133 1207 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 CCR9P51686 369 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 MAT1AQ00266 395 aaKnown RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 GGTLC2Q14390 218 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 GRAMD2AQ8IUY3 354 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 DNAAF1Q8NEP3 725 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 CEP76Q8TAP6 659 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 HGDQ93099 445 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 SGTBQ96EQ0 304 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 DDOQ99489 341 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 CCDC3Q9BQI4 270 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 TWSG1Q9GZX9 223 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 NARFLQ9H6Q4 476 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 HRASLSQ9HDD0 168 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 FBXL21Q9UKT6 434 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 A0A0A6YYC8 382 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 A0A1B0GTH9 108 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 BLOC1S5-TXNDC5H3BN57 136 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 I3L1I5 382 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 GSTZ1O43708 216 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 PEX14O75381 377 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 GATBO75879 557 aaKnown RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 EXOSC2Q13868 293 aaKnown RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 SLC22A10Q63ZE4 541 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 KIAA1324Q6UXG2 1013 aaKnown RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 RIT1Q92963 219 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 WDR89Q96FK6 387 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 Q96M85 177 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 VSTM2LQ96N03 204 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 SEC22CQ9BRL7 303 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 MKKSQ9NPJ1 570 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-217ENST00000495688 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 SEC16AO15027 2179 aa11.91□□□□□ -0.5
PTPN7-217ENST00000495688 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 FOXS1O43638 330 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF250P15622 560 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ST6GAL1P15907 406 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 DPP4P27487 766 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 RPS27P42677 84 aaKnown RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 CDKN2AP42771 156 aaKnown RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 SOX2P48431 317 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 BTG2P78543 158 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 DYRK1AQ13627 763 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF267Q14586 743 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ZNHIT3Q15649 155 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 OTPQ5XKR4 325 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 UNQ9370/PRO34162Q6UXP9 181 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 RNF44Q7L0R7 432 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 RSC1A1Q92681 617 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 DNAJA3Q96EY1 480 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 GABRG3Q99928 467 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF436Q9C0F3 470 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 LMAN2LQ9H0V9 348 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 GLTPQ9NZD2 209 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF879B4DU55 563 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 CSTAP01040 98 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 HRGP04196 525 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 TMIGD3P0DMS9 266 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 OR8G3PP0DMU2 310 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 RPL6Q02878 288 aaKnown RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 PLA2G7Q13093 441 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 SNTA1Q13424 505 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 LINC01590Q5TEZ4 76 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 APOOLQ6UXV4 268 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 CMIPQ8IY22 773 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 SLC37A2Q8TED4 501 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 HOXB13Q92826 284 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-217ENST00000495688 CCDC120Q96HB5 630 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 MRGPRX1Q96LB2 322 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 POLE3Q9NRF9 147 aa11.9□□□□□ -0.5
PTPN7-217ENST00000495688 BRWD1Q9NSI6 2320 aa11.9□□□□□ -0.51
PTPN7-217ENST00000495688 A0A087WUJ7 227 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RPS10-NUDT3A0A1W2PQS6 291 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 TMEM72A0PK05 275 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 LINC00862A6NCI5 91 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 AIPO00170 330 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms