RNA–Protein interactions for RNA: ENST00000495606.5

IMP4-217, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 4

Gene IMP4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-217ENST00000495606 NAA11Q9BSU3 229 aaPredicted RBP12.9□□□□□ -0.34
IMP4-217ENST00000495606 NDUFAF4Q9P032 175 aa12.9□□□□□ -0.34
IMP4-217ENST00000495606 ACTR3BQ9P1U1 418 aa12.9□□□□□ -0.34
IMP4-217ENST00000495606 SAMD4AQ9UPU9 718 aaKnown RBP12.9□□□□□ -0.34
IMP4-217ENST00000495606 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
IMP4-217ENST00000495606 MPDZO75970 2070 aa12.9□□□□□ -0.34
IMP4-217ENST00000495606 INTS1Q8N201 2190 aaKnown RBP12.9□□□□□ -0.34
IMP4-217ENST00000495606 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 M0R082 166 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 ACOT8O14734 319 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 PRSS23O95084 383 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 CH25HO95992 272 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 SEMG1P04279 462 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 CRHP06850 196 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 YES1P07947 543 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 UQCRC1P31930 480 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 RNPS1Q15287 305 aaKnown RBP12.89□□□□□ -0.35
IMP4-217ENST00000495606 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 SLC25A35Q3KQZ1 300 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 DNAL1Q4LDG9 190 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 TMEM201Q5SNT2 666 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
IMP4-217ENST00000495606 GTF2IRD2BQ6EKJ0 949 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 ABLIM2Q6H8Q1 611 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 GTF2IRD2Q86UP8 949 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 SLC43A2Q8N370 569 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 ZNF587Q96SQ5 575 aaPredicted RBP12.89□□□□□ -0.35
IMP4-217ENST00000495606 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
IMP4-217ENST00000495606 MAN2C1Q9NTJ4 1040 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 JKAMPQ9P055 326 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.89□□□□□ -0.35
IMP4-217ENST00000495606 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
IMP4-217ENST00000495606 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 A8MXE2 369 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 EIF1BO60739 113 aaKnown RBP12.88□□□□□ -0.35
IMP4-217ENST00000495606 HPRP00739 348 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 FUT1P19526 365 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 ASCL1P50553 236 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 FAM27E3Q08E93 113 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 FAM69AQ5T7M9 428 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 TMEM225Q6GV28 225 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 LCN8Q6JVE9 175 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 ZIC4Q8N9L1 334 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 PIGXQ8TBF5 258 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 TMEM239Q8WW34 195 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 MPP4Q96JB8 637 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 RBM24Q9BX46 236 aaKnown RBP12.88□□□□□ -0.35
IMP4-217ENST00000495606 C20orf141Q9NUB4 165 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
IMP4-217ENST00000495606 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 PRSS50Q9UI38 385 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 TESMINQ9Y4I5 508 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 KLF2Q9Y5W3 355 aaPredicted RBP12.88□□□□□ -0.35
IMP4-217ENST00000495606 DCHS2Q6V1P9 2916 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 CACNA1CQ13936 2221 aa12.88□□□□□ -0.35
IMP4-217ENST00000495606 AKAP9Q99996 3911 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 MS4A18H0YCH9 400 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 DNPH1O43598 174 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 IGHV3-9P01782 118 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 ST3GAL3Q11203 375 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 SLC17A1Q14916 467 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 TRAM2Q15035 370 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 MS4A18Q3C1V0 323 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 OR9K2Q8NGE7 335 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 OR6K3Q8NGY3 331 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 OR52J3Q8NH60 311 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 ZNF385AQ96PM9 386 aaKnown RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 EPYCQ99645 322 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 PIGMQ9H3S5 423 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 BCO1Q9HAY6 547 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 PLSCR4Q9NRQ2 329 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 GLRX2Q9NS18 164 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 GALNT8Q9NY28 637 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 FAM32AQ9Y421 112 aaKnown RBP12.87□□□□□ -0.35
IMP4-217ENST00000495606 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
IMP4-217ENST00000495606 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
IMP4-217ENST00000495606 A0A087WUU8 490 aa12.86□□□□□ -0.35
IMP4-217ENST00000495606 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
IMP4-217ENST00000495606 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms