RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GP6Q9HCN6 339 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 MEPEQ9NQ76 525 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 PLSCR4Q9NRQ2 329 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 MAN2C1Q9NTJ4 1040 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 NDUFAF4Q9P032 175 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 C6orf203Q9P0P8 240 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 IGKV3D-15A0A087WSY6 115 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 ZNF724A8MTY0 619 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 ACOT8O14734 319 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 MSTNO14793 375 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 ATP5HO75947 161 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 THRBP10828 461 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 EXOC3L2Q2M3D2 409 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 IQCCQ4KMZ1 466 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 TMEM225Q6GV28 225 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 OFCC1Q8IZS5 231 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 TMEM239Q8WW34 195 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 RNASE6Q93091 150 aaKnown RBP17.26■□□□□ 0.35
HDAC4-212ENST00000495497 ASB9Q96DX5 294 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 CHST11Q9NPF2 352 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 GALNT8Q9NY28 637 aa17.26■□□□□ 0.35
HDAC4-212ENST00000495497 INTS1Q8N201 2190 aaKnown RBP17.26■□□□□ 0.35
HDAC4-212ENST00000495497 SPTBN1Q01082 2364 aaKnown RBP17.25■□□□□ 0.35
HDAC4-212ENST00000495497 FZD7O75084 574 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 IFNA8P32881 189 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 SLC16A1P53985 500 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 TRAM2Q15035 370 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 FBXL19-AS1Q494R0 122 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 GALNT5Q7Z7M9 940 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 CYP4Z1Q86W10 505 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 LRRC17Q8N6Y2 441 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 OR9K2Q8NGE7 335 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 OR6S1Q8NH40 331 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 C20orf141Q9NUB4 165 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 EMC3Q9P0I2 261 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 NOSIPQ9Y314 301 aaKnown RBP17.25■□□□□ 0.35
HDAC4-212ENST00000495497 FLVCR1Q9Y5Y0 555 aa17.25■□□□□ 0.35
HDAC4-212ENST00000495497 MPDZO75970 2070 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ENO4A6NNW6 628 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 MT-ND1P03886 318 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 FABP3P05413 133 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 RHCEP18577 417 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 RBM34P42696 430 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 IL1RL1Q01638 556 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 FAM27E3Q08E93 113 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 TRAP1Q12931 704 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ZNF74Q16587 644 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 MTX3Q5HYI7 312 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ZNF787Q6DD87 383 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 TBPL2Q6SJ96 375 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 TFAP2EQ6VUC0 442 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 MEX3BQ6ZN04 569 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 H1FNTQ75WM6 255 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 SLC46A3Q7Z3Q1 461 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 MEX3DQ86XN8 651 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ZIC4Q8N9L1 334 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 PIK3C3Q8NEB9 887 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 MCUR1Q96AQ8 359 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 LRGUKQ96M69 825 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 HS6ST2Q96MM7 605 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ZNF385AQ96PM9 386 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 TACO1Q9BSH4 297 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 ASPNQ9BXN1 380 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 SLC19A3Q9BZV2 496 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 NMNAT1Q9HAN9 279 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 PRSS50Q9UI38 385 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 RASD1Q9Y272 281 aa17.24■□□□□ 0.35
HDAC4-212ENST00000495497 FAM32AQ9Y421 112 aaKnown RBP17.24■□□□□ 0.35
HDAC4-212ENST00000495497 SPTAN1Q13813 2472 aaKnown RBP17.23■□□□□ 0.35
HDAC4-212ENST00000495497 MS4A18H0YCH9 400 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 HPRP00739 348 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 NQO1P15559 274 aaKnown RBP17.23■□□□□ 0.35
HDAC4-212ENST00000495497 RASSF2P50749 326 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 PMS2P3Q13401 168 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 MS4A18Q3C1V0 323 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 CCDC121Q6ZUS5 278 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 EPHX4Q8IUS5 362 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 ZDHHC21Q8IVQ6 265 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 OR52J3Q8NH60 311 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 SF3B5Q9BWJ5 86 aaKnown RBP17.23■□□□□ 0.35
HDAC4-212ENST00000495497 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-212ENST00000495497 B3GAT1Q9P2W7 334 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 MED31Q9Y3C7 131 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 TESMINQ9Y4I5 508 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 CACNA1CQ13936 2221 aa17.23■□□□□ 0.35
HDAC4-212ENST00000495497 A0A087WUU8 490 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 GPR171O14626 319 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 VAMP5O95183 116 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 STAMBPO95630 424 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 MT-ATP6P00846 226 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 IGHV3-9P01782 118 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 H1F0P07305 194 aaKnown RBP17.22■□□□□ 0.35
HDAC4-212ENST00000495497 UMPSP11172 480 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 IGFBP2P18065 325 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 FUT1P19526 365 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 OR3A2P47893 321 aa17.22■□□□□ 0.35
HDAC4-212ENST00000495497 ERFP50548 548 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms