RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SLCO5A1Q9H2Y9 848 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 DLL4Q9NR61 685 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 LAMP3Q9UQV4 416 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 KLF10Q13118 480 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 CYLC2Q14093 348 aaPredicted RBP29.2■■■□□ 2.26
CBX4-203ENST00000494546 FAM91A1Q658Y4 838 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 RANBP3LQ86VV4 465 aaPredicted RBP29.2■■■□□ 2.26
CBX4-203ENST00000494546 KDM8Q8N371 416 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 IGFBPL1Q8WX77 278 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 TAAR8Q969N4 342 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 CXorf56Q9H5V9 222 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 MRGBPQ9NV56 204 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 SLC25A15Q9Y619 301 aa29.2■■■□□ 2.26
CBX4-203ENST00000494546 IGKV1D-42A0A075B6H8 117 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 TPST2O60704 377 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 KRT33AO76009 404 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 ZNF83P51522 516 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 MMEL1Q495T6 779 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 ZNF672Q499Z4 452 aaPredicted RBP29.19■■■□□ 2.26
CBX4-203ENST00000494546 C5orf46Q6UWT4 87 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 SLC30A8Q8IWU4 369 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 POMGNT2Q8NAT1 580 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 EVA1AQ9H8M9 152 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 SAR1AQ9NR31 198 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 SEC14L4Q9UDX3 406 aa29.19■■■□□ 2.26
CBX4-203ENST00000494546 TRAV36DV7A0A075B6V5 113 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 A0A0B4J2E0 115 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 A0A1B0GX12 115 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 M0R3H8 397 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 OR2T1O43869 369 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 MPGP29372 298 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 PCGF2P35227 344 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 PTH2RP49190 550 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 RIPPLY3P57055 190 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 TGFBR3Q03167 851 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 DUSP7Q16829 419 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 FAM69AQ5T7M9 428 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 NANOGP8Q6NSW7 305 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 YTHDF3Q7Z739 585 aaKnown RBP29.18■■■□□ 2.26
CBX4-203ENST00000494546 EPHX4Q8IUS5 362 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 GSX2Q9BZM3 304 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 NANOGQ9H9S0 305 aa29.18■■■□□ 2.26
CBX4-203ENST00000494546 ABCD4O14678 606 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 LGI1O95970 557 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 FOSL1P15407 271 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 CDH2P19022 906 aaPredicted RBP29.17■■■□□ 2.26
CBX4-203ENST00000494546 CBLP22681 906 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 SELENOPP49908 381 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 REP15Q6BDI9 236 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 NIPAL3Q6P499 406 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 KLHL17Q6TDP4 642 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 PATL1Q86TB9 770 aaKnown RBP29.17■■■□□ 2.26
CBX4-203ENST00000494546 LRRC58Q96CX6 371 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 ARHGDIGQ99819 225 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 C1QTNF6Q9BXI9 259 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 AMBRA1Q9C0C7 1298 aa29.17■■■□□ 2.26
CBX4-203ENST00000494546 A0A087WUJ7 227 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 M0R082 166 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 MRASO14807 208 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 AIM2O14862 343 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 PTNP21246 168 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 LGALS3BPQ08380 585 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 MAPRE2Q15555 327 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 RABL3Q5HYI8 236 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 TMEM108Q6UXF1 575 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 C1orf162Q8NEQ5 155 aaPredicted RBP29.16■■■□□ 2.26
CBX4-203ENST00000494546 GPR32P1Q8NGA4 272 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 ZNF417Q8TAU3 575 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 SLC26A7Q8TE54 656 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 SMAP2Q8WU79 429 aaPredicted RBP29.16■■■□□ 2.26
CBX4-203ENST00000494546 Q96MF0 132 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 ZNF587Q96SQ5 575 aaPredicted RBP29.16■■■□□ 2.26
CBX4-203ENST00000494546 MCHR1Q99705 422 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 SH3GL1Q99961 368 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 CCDC134Q9H6E4 229 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 MED4Q9NPJ6 270 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 KLHL14Q9P2G3 628 aa29.16■■■□□ 2.26
CBX4-203ENST00000494546 M0R1B8 84 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 ZNF43P17038 809 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 GRPRP30550 384 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 GZMMP51124 257 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 CDH12P55289 794 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 RPS4XP62701 263 aaKnown RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 IL1RL1Q01638 556 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 VMACQ2NL98 169 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 COQ5Q5HYK3 327 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 INTS11Q5TA45 600 aaKnown RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 PRSS57Q6UWY2 283 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 ABHD12BQ7Z5M8 362 aaPredicted RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 SNX32Q86XE0 403 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 PIAS4Q8N2W9 510 aaPredicted RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 C17orf78Q8N4C9 275 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 WDR31Q8NA23 367 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 VANGL1Q8TAA9 524 aaPredicted RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 TAMM41Q96BW9 452 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 EPYCQ99645 322 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 GSX1Q9H4S2 264 aaPredicted RBP29.15■■■□□ 2.26
CBX4-203ENST00000494546 SLC17A5Q9NRA2 495 aa29.15■■■□□ 2.26
CBX4-203ENST00000494546 ARID1AO14497 2285 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 ZNF469Q96JG9 3925 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms