RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
BRCA1-223ENST00000494123 IL1RL1Q01638 556 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 LTBQ06643 244 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
BRCA1-223ENST00000494123 SEC23BQ15437 767 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 NCCRP1Q6ZVX7 275 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-223ENST00000494123 MARVELD2Q8N4S9 558 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 LINC00471Q8N535 108 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 ZNF417Q8TAU3 575 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 ABHD3Q8WU67 409 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 RND1Q92730 232 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 ZNF587Q96SQ5 575 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-223ENST00000494123 FUZQ9BT04 418 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 VNN3Q9NY84 501 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 KLHL13Q9P2N7 655 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 ZNF229Q9UJW7 825 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 SLC5A6Q9Y289 635 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 AQP7P3A6NL99 342 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 EFCAB9A8MZ26 197 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 OR7A10O76100 309 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 OR6A2O95222 327 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 FUT1P19526 365 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 GPR4P46093 362 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 LIMS1P48059 325 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 ARHGDIAP52565 204 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 H3F3AP84243 136 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 PMS2P3Q13401 168 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 ATP6AP1Q15904 470 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 SEM1Q6ZVN7 128 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
BRCA1-223ENST00000494123 SLC46A3Q7Z3Q1 461 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 NANOGNBQ7Z5D8 188 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 GPAT4Q86UL3 456 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 CCDC103Q8IW40 242 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 GCNT2Q8N0V5 402 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 SCAIQ8N9R8 606 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 OR5J2Q8NH18 312 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 INTS12Q96CB8 462 aaKnown RBP13□□□□□ -0.33
BRCA1-223ENST00000494123 FAM46AQ96IP4 442 aaKnown RBP13□□□□□ -0.33
BRCA1-223ENST00000494123 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 BDH2Q9BUT1 245 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 KLHL9Q9P2J3 617 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 SEC14L4Q9UDX3 406 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 DOCK7Q96N67 2140 aa13□□□□□ -0.33
BRCA1-223ENST00000494123 HSPB2A8KAH6 182 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 ZNF814B7Z6K7 855 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 CYTIPO60759 359 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 VAMP5O95183 116 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 RCBTB2O95199 551 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 TMIGD3P0DMS9 266 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 HSPB2Q16082 182 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 ABLIM2Q6H8Q1 611 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 MEX3DQ86XN8 651 aaKnown RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 LRRC17Q8N6Y2 441 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 OR4C15Q8NGM1 316 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 LRTOMTQ8WZ04 291 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 CCDC120Q96HB5 630 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 GMPPAQ96IJ6 420 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 S100A14Q9HCY8 104 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 MRPL39Q9NYK5 338 aaKnown RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 COQ3Q9NZJ6 369 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 CLEC4AQ9UMR7 237 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 RASD1Q9Y272 281 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 BLOC1S5-TXNDC5H3BN57 136 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 RAMP1O60894 148 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 FZD7O75084 574 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 TOXO94900 526 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 ADORA3P0DMS8 318 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 MAKP20794 623 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 AHCYP23526 432 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 CEACAM8P31997 349 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 IST1P53990 364 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 MICAQ29983 383 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 TMEM201Q5SNT2 666 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 OAFQ86UD1 273 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 GIPC3Q8TF64 312 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 PSD2Q9BQI7 771 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 TACO1Q9BSH4 297 aaKnown RBP12.99□□□□□ -0.33
BRCA1-223ENST00000494123 EMC3Q9P0I2 261 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 EMC9Q9Y3B6 208 aa12.99□□□□□ -0.33
BRCA1-223ENST00000494123 MYO7BQ6PIF6 2116 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 MED12LQ86YW9 2145 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 MYO18BQ8IUG5 2567 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 A0A0G2JNJ9 132 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 H0YHG0 523 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 OMPP47874 163 aa12.98□□□□□ -0.33
BRCA1-223ENST00000494123 SLC9A3P48764 834 aa12.98□□□□□ -0.33
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