RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 UPB1Q9UBR1 384 aa7.49□□□□□ -1.21
LRCH3-219ENST00000494069 GDF2Q9UK05 429 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-219ENST00000494069 SLC9A8Q9Y2E8 581 aa7.49□□□□□ -1.21
LRCH3-219ENST00000494069 IFT52Q9Y366 437 aa7.49□□□□□ -1.21
LRCH3-219ENST00000494069 ALPK2Q86TB3 2170 aa7.49□□□□□ -1.21
LRCH3-219ENST00000494069 IGKV1D-42A0A075B6H8 117 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 A0A1B0GWA3 101 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 A0A1W2PP18 115 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TMEM247A6NEH6 219 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 C5orf58C9J3I9 102 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 FTCDNL1E5RQL4 147 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TPST2O60704 377 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 UPK3AO75631 287 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 LGI1O95970 557 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 HEXAP06865 529 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PNMTP11086 282 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 H2AFXP16104 143 aaPredicted RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 GPX2P18283 190 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 CBLP22681 906 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PCSK6P29122 969 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PRKAR1BP31321 381 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 ACVR1BP36896 505 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 RPS5P46782 204 aaKnown RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 ATP4BP51164 291 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 MAP2K6P52564 334 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 CDH11P55287 796 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 SF3A3Q12874 501 aaKnown RBP eCLIP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 FADDQ13158 208 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 SELPLGQ14242 412 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 SQLEQ14534 574 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 CLEC12BQ2HXU8 276 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 HIKESHIQ53FT3 197 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PRAMEF8Q5VWM4 474 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PRAMEF7Q5VXH5 474 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TMEM225Q6GV28 225 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 REEP3Q6NUK4 255 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 CREB3L2Q70SY1 520 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 HDXQ7Z353 690 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PTOV1Q86YD1 416 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 STK35Q8TDR2 534 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 HTRA1Q92743 480 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TAAR8Q969N4 342 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 GTPBP3Q969Y2 492 aaKnown RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TMEM45BQ96B21 275 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TRAF4Q9BUZ4 470 aaPredicted RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 SF3B5Q9BWJ5 86 aaKnown RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 TAPBPLQ9BX59 468 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 AMBRA1Q9C0C7 1298 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 RAD21L1Q9H4I0 556 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 CACYBPQ9HB71 228 aaKnown RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 SLC17A5Q9NRA2 495 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 PARPBPQ9NWS1 579 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.48□□□□□ -1.21
LRCH3-219ENST00000494069 DCTN4Q9UJW0 460 aa7.48□□□□□ -1.21
LRCH3-219ENST00000494069 ELOA3DA6NLF2 546 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-219ENST00000494069 HMGB1P1B2RPK0 211 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-219ENST00000494069 AHSA1O95433 338 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ETS2P15036 469 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 MPGP29372 298 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 MTPNP58546 118 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 TUBA1BP68363 451 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 TUBA4AP68366 448 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 IRX1P78414 480 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-219ENST00000494069 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 DMTNQ08495 405 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 SCARB2Q14108 478 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 VEZF1Q14119 521 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ZSWIM7Q19AV6 140 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ELOA3BQ3SY89 546 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 RUNDC3AQ59EK9 446 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 OR7E24Q6IFN5 339 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 NIPAL3Q6P499 406 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 DHRS4L2Q6PKH6 230 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 SLC22A25Q6T423 547 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 C6orf89Q6UWU4 347 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 TMEM108Q6UXF1 575 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 TUBA1AQ71U36 451 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 DTX2Q86UW9 622 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 WDFY1Q8IWB7 410 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 SMYD1Q8NB12 490 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ELOA3Q8NG57 546 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 MFSD8Q8NHS3 518 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 MAGEB18Q96M61 343 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ALKBH3Q96Q83 286 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-219ENST00000494069 SLCO5A1Q9H2Y9 848 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 ARMC7Q9H6L4 198 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 B3GAT1Q9P2W7 334 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 B3GALT5Q9Y2C3 310 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 GMEB1Q9Y692 573 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 TLN2Q9Y4G6 2542 aa7.47□□□□□ -1.21
LRCH3-219ENST00000494069 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.21
LRCH3-219ENST00000494069 A0A096LPE4 126 aa7.46□□□□□ -1.22
LRCH3-219ENST00000494069 A0A1W2PPZ6 126 aa7.46□□□□□ -1.22
LRCH3-219ENST00000494069 INAFM1C9JVW0 142 aa7.46□□□□□ -1.22
LRCH3-219ENST00000494069 LRRN3E7EW58 273 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms