RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PSMC3IPQ9P2W1 217 aaPredicted RBP4.6□□□□□ -1.67
SMC2-205ENST00000493955 ABCD2Q9UBJ2 740 aa4.6□□□□□ -1.67
SMC2-205ENST00000493955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMC2-205ENST00000493955 ADAMTSL3P82987 1691 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 TUBAL3A6NHL2 446 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 LOC110117498-PIK3R3F6TDL0 507 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 K7N7A8 449 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 TMEM50AO95807 157 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 KRT14P02533 472 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 SEMG1P04279 462 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 CHMLP26374 656 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 AQP1P29972 269 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 HNRNPH3P31942 346 aaKnown RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 SHMT2P34897 504 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 RPS8P62241 208 aaKnown RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 OR5I1Q13606 314 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 XKR7Q5GH72 579 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 KLF17Q5JT82 389 aaPredicted RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 LRRC66Q68CR7 880 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 PPP1R27Q86WC6 154 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 ZNF677Q86XU0 584 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 HPS6Q86YV9 775 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 FTMTQ8N4E7 242 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 ZNF525Q8N782 197 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 OR4K14Q8NGD5 310 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 PAGE5Q96GU1 130 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 KCNA7Q96RP8 456 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 RIOK1Q9BRS2 568 aaKnown RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 DEFB126Q9BYW3 111 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 FOLH1BQ9HBA9 442 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 CAB39Q9Y376 341 aaPredicted RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
SMC2-205ENST00000493955 SH3TC1Q8TE82 1336 aa4.59□□□□□ -1.67
SMC2-205ENST00000493955 WDR7Q9Y4E6 1490 aa4.59□□□□□ -1.68
SMC2-205ENST00000493955 MADDQ8WXG6 1647 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 OR5B21A6NL26 309 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 TMEM110-MUSTN1A8MSY1 372 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 TCP11X1B4DZS4 312 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 DNALI1O14645 258 aaPredicted RBP4.58□□□□□ -1.68
SMC2-205ENST00000493955 TOM1O60784 492 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 SERF1AO75920 110 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 P04436 131 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 GNMTQ14749 295 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 DGUOKQ16854 277 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 PARP15Q460N3 678 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 UTF1Q5T230 341 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 RAET1LQ5VY80 246 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 TFAP2EQ6VUC0 442 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 LRRC74BQ6ZQY2 392 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 ERI1Q8IV48 349 aaKnown RBP4.58□□□□□ -1.68
SMC2-205ENST00000493955 TPRX1Q8N7U7 411 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 OR9A1PQ8NGU1 263 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 NEIL2Q969S2 332 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 TM4SF19Q96DZ7 209 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 ZNF184Q99676 751 aaPredicted RBP4.58□□□□□ -1.68
SMC2-205ENST00000493955 MRPL45Q9BRJ2 306 aaKnown RBP4.58□□□□□ -1.68
SMC2-205ENST00000493955 SUDS3Q9H7L9 328 aaPredicted RBP4.58□□□□□ -1.68
SMC2-205ENST00000493955 HOXC10Q9NYD6 342 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 BCORL1Q5H9F3 1711 aa4.58□□□□□ -1.68
SMC2-205ENST00000493955 PHF3Q92576 2039 aaKnown RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 IGHV1OR21-1A0A087WYE8 117 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 A0A0G2JRQ6 117 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 LGI1O95970 557 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 KITLGP21583 273 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 P2RY4P51582 365 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 KPNA2P52292 529 aaKnown RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 PPIL2Q13356 520 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 MICBQ29980 383 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 PRR30Q53SZ7 412 aaPredicted RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 UNQ9370/PRO34162Q6UXP9 181 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 ZNF589Q86UQ0 364 aaPredicted RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 CDC20BQ86Y33 519 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 OR4F6Q8NGB9 312 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 FGF11Q92914 225 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 CNPY3Q9BT09 278 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 NCOR1P1Q9H4R4 102 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 ZNF702PQ9H963 129 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 NEK6Q9HC98 313 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 ZNF107Q9UII5 783 aaPredicted RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 N6AMT1Q9Y5N5 214 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 TEX14Q8IWB6 1497 aa4.57□□□□□ -1.68
SMC2-205ENST00000493955 RIMS1Q86UR5 1692 aaKnown RBP4.57□□□□□ -1.68
SMC2-205ENST00000493955 IGKV1D-8A0A087WSZ0 117 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 OR2AG2A6NM03 316 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 MBTPS2O43462 519 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 PSTPIP1O43586 416 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 HCRTR1O43613 425 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 IGHV3-23P01764 117 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 SERPIND1P05546 499 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 GIG44P09565 113 aaPredicted RBP4.56□□□□□ -1.68
SMC2-205ENST00000493955 OR3A4PP47883 348 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 SLC26A2P50443 739 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 KCNJ2P63252 427 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 SPANXN2Q5MJ10 180 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 MAGI3Q5TCQ9 1506 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 RAI1Q7Z5J4 1906 aaPredicted RBP4.56□□□□□ -1.68
SMC2-205ENST00000493955 RDH10Q8IZV5 341 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 ACOT4Q8N9L9 421 aa4.56□□□□□ -1.68
SMC2-205ENST00000493955 OR10H4Q8NGA5 316 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms