RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 Q6ZPB1 254 aaPredicted RBP17.37■□□□□ 0.37
USP39-218ENST00000493829 FGD2Q7Z6J4 655 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 GHDCQ8N2G8 530 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 PACRGLQ8N7B6 248 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 MOSPD2Q8NHP6 518 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 OSTF1Q92882 214 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 WDYHV1Q96HA8 205 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 UCN2Q96RP3 112 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 TOR3AQ9H497 397 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 SMPD3Q9NY59 655 aaPredicted RBP17.37■□□□□ 0.37
USP39-218ENST00000493829 REV1Q9UBZ9 1251 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 ZNF814B7Z6K7 855 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 C11orf98E9PRG8 122 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 IGF2P01344 180 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 POLR2IP36954 125 aaKnown RBP17.36■□□□□ 0.37
USP39-218ENST00000493829 AQP2P41181 271 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 FXYD6P3P58550 94 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 CSNK2A1P68400 391 aaPredicted RBP17.36■□□□□ 0.37
USP39-218ENST00000493829 SLC35A1P78382 337 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 KDM8Q8N371 416 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 TMEM99Q8N816 258 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 OR8D4Q8NGM9 314 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 OR5J2Q8NH18 312 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 SAMD8Q96LT4 415 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 MBOAT4Q96T53 435 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 TBC1D23Q9NUY8 699 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 SIGLEC7Q9Y286 467 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 KIAA1549Q9HCM3 1950 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 DNAJC13O75165 2243 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 RAMP1O60894 148 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 TP53P04637 393 aaPredicted RBP17.36■□□□□ 0.37
USP39-218ENST00000493829 OSMP13725 252 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 AHCYP23526 432 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 EPHA2P29317 976 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 RAD23AP54725 363 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 FHL1Q13642 323 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 ZBED5Q49AG3 693 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 PDSS1Q5T2R2 415 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 THSD4Q6ZMP0 1018 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 RASSF6Q6ZTQ3 369 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 IQCF1Q8N6M8 205 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 OR6S1Q8NH40 331 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 DNAJC9Q8WXX5 260 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 ROBO4Q8WZ75 1007 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 SARAFQ96BY9 339 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 WBP1Q96G27 269 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 SLX1AQ9BQ83 275 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 RASSF4Q9H2L5 321 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 OR52D1Q9H346 318 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 CHST11Q9NPF2 352 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 KLHL13Q9P2N7 655 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 TRAPPC4Q9Y296 219 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 CDH10Q9Y6N8 788 aa17.36■□□□□ 0.37
USP39-218ENST00000493829 DLGAP1O14490 977 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 PLGP00747 810 aaPredicted RBP17.35■□□□□ 0.37
USP39-218ENST00000493829 F13BP05160 661 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 ADORA3P0DMS8 318 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 SLC9A3P48764 834 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 RPS3AP61247 264 aaKnown RBP17.35■□□□□ 0.37
USP39-218ENST00000493829 RPS4XP62701 263 aaKnown RBP17.35■□□□□ 0.37
USP39-218ENST00000493829 RPL18Q07020 188 aaKnown RBP17.35■□□□□ 0.37
USP39-218ENST00000493829 BCL2A1Q16548 175 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 SMARCD3Q6STE5 483 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 CD300LDQ6UXZ3 194 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 CHMP1BQ7LBR1 199 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 TEX47Q8TBZ9 253 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 TUBA1CQ9BQE3 449 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 ENKD1Q9H0I2 346 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 C8orf4Q9NR00 106 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 PNPLA3Q9NST1 481 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 CORINQ9Y5Q5 1042 aa17.35■□□□□ 0.37
USP39-218ENST00000493829 HTR3EA5X5Y0 456 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 SMAD9O15198 467 aaKnown RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 OR6A2O95222 327 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 CPN1P15169 458 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 CDH2P19022 906 aaPredicted RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 ENPP1P22413 925 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 UQCRC1P31930 480 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 PTGS2P35354 604 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 RPL4P36578 427 aaKnown RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 COX10Q12887 443 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 MFSD13AQ14CX5 517 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 PON3Q15166 354 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 ZNF239Q16600 458 aaKnown RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 KRTCAP3Q53RY4 240 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 WLSQ5T9L3 541 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 TMEM236Q5W0B7 351 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 GFRALQ6UXV0 394 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 H1FNTQ75WM6 255 aaPredicted RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 GPAT4Q86UL3 456 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 CHERPQ8IWX8 916 aaKnown RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 PARP8Q8N3A8 854 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 CYGBQ8WWM9 190 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 LIPHQ8WWY8 451 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 ZHX1-C8orf76Q96EF9 292 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 ZNF570Q96NI8 536 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 MRPL39Q9NYK5 338 aaKnown RBP17.34■□□□□ 0.37
USP39-218ENST00000493829 EPG5Q9HCE0 2579 aa17.34■□□□□ 0.37
USP39-218ENST00000493829 CACNA1BQ00975 2339 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms