RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DCNP07585 359 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 DTYMKP23919 212 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 NOVA1P51513 510 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 H2BFSP57053 126 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 VEZF1Q14119 521 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 NFATC4Q14934 902 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 TEAD2Q15562 447 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 GUK1Q16774 197 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 CEACAM20Q6UY09 585 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 CXXC5Q7LFL8 322 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 FAM160A2Q8N612 972 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 FRMD1Q8N878 549 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 HSD17B11Q8NBQ5 300 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 SORCS1Q8WY21 1168 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 PPP1R16AQ96I34 528 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 FDXACB1Q9BRP7 624 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ATG5Q9H1Y0 275 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM184CQ9NVA4 438 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 FAM50BQ9Y247 325 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 COLEC10Q9Y6Z7 277 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 KIAA1549LQ6ZVL6 1849 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 CHD3Q12873 2000 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 TRDV1A0A1B0GX56 115 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 H3BRB1 525 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 WNT9AO14904 365 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 OR2J2O76002 312 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 UBL3O95164 117 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 CLDN9O95484 217 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 PTBP3O95758 552 aaKnown RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 BCHEP06276 602 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 C8GP07360 202 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 CST2P09228 141 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 PIPP12273 146 aaPredicted RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TPT1P13693 172 aaKnown RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TYMPP19971 482 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TFPI2P48307 235 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SULT1A1P50225 295 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 PTSQ03393 145 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 ITKQ08881 620 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 MAP2K5Q13163 448 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 HERPUD1Q15011 391 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 ATP6V1FQ16864 119 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF791Q3KP31 576 aaPredicted RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 HBMQ6B0K9 141 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 ADNP2Q6IQ32 1131 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 EIF5AL1Q6IS14 154 aaKnown RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 GAREM2Q75VX8 874 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TMED4Q7Z7H5 227 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 GCNT2Q8N0V5 402 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 IQCF1Q8N6M8 205 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 CELF5Q8N6W0 485 aaKnown RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 STAG3L4Q8TBR4 150 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 CD99L2Q8TCZ2 262 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 EEF1AKMT1Q8WVE0 214 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SECTM1Q8WVN6 248 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SMARCD2Q92925 531 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SEC22AQ96IW7 307 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 WDR92Q96MX6 357 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 NKX3-1Q99801 234 aaPredicted RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 MESP1Q9BRJ9 268 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 EGLN1Q9GZT9 426 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SEPSECSQ9HD40 501 aaKnown RBP6.34□□□□□ -1.4
VPS13B-205ENST00000493587 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 SLC6A13Q9NSD5 602 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TAS2R5Q9NYW4 299 aa6.34□□□□□ -1.4
VPS13B-205ENST00000493587 TTC3P53804 2025 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 A0A0B4J2A0 478 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TVP23AA6NH52 213 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ITGA10O75578 1167 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ABLIM3O94929 683 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR2A4O95047 310 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 VAMP5O95183 116 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SOD3P08294 240 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CXCL8P10145 99 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SCNN1AP37088 669 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 KIR3DL1P43629 444 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR4D1Q15615 310 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 DPYSL2Q16555 572 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 LINC00303Q3SY05 128 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PRRT3Q5FWE3 981 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF626Q68DY1 528 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 MSRB3Q8IXL7 192 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 POGLUT1Q8NBL1 392 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR5D16Q8NGK9 328 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR1L6Q8NGR2 347 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 GPR148Q8TDV2 347 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RGP1Q92546 391 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM159Q96B96 161 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 IGSF21Q96ID5 467 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 FAM193BQ96PV7 902 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RNF2Q99496 336 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TBL1YQ9BQ87 522 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RIOK2Q9BVS4 552 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 EIF5A2Q9GZV4 153 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 WDR13Q9H1Z4 485 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 EXO5Q9H790 373 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms