RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 POFUT1Q9H488 388 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 C2orf42Q9NWW7 574 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 MBD2Q9UBB5 411 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 FBXO4Q9UKT5 387 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 CENPVL1A0A0U1RR11 272 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 RIIAD1A6NNX1 92 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 F5H0A9 414 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 H3BSH0 61 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 TXNL1O43396 289 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 BCL2L11O43521 198 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 NARSO43776 548 aaKnown RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 FARS2O95363 451 aaKnown RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 S100A6P06703 90 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 GKN3PP0CG01 181 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 GTF2F2P13984 249 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 HTR2AP28223 471 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PGAP1Q75T13 922 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 NAA40Q86UY6 237 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ZSCAN1Q8NBB4 408 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 OR6N1Q8NGY5 312 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 OR4C6Q8NH72 309 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF689Q96CS4 500 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 APMAPQ9HDC9 416 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 SLC35A3Q9Y2D2 325 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PMS2P1A4D2B8 440 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 C5orf52A6NGY3 159 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 HTR3BO95264 441 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 CD3DP04234 171 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 S100A8P05109 93 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 F3P13726 295 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 SLC2A5P22732 501 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 AGTR1P30556 359 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 PPT1P50897 306 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 GPR143P51810 404 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 RAB5BP61020 215 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MRPS10P82664 201 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 ECH1Q13011 328 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 GLT8D1Q68CQ7 371 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 NDUFAF7Q7L592 441 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 TRAM1L1Q8N609 369 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 GPR174Q9BXC1 333 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 PRMT8Q9NR22 394 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 CLDND1Q9NY35 253 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 TNFSF18Q9UNG2 199 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 A0A1W2PPE3 182 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 RNF222A6NCQ9 220 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 COLCA2A8K830 154 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 H7C417 338 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 POP4O95707 220 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 OLFM2O95897 454 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 RAB40ALP0C0E4 278 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 NTSP30990 170 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MC3RP41968 323 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 SLC11A1P49279 550 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 OR7A5Q15622 319 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 EIF2S3LQ2VIR3 472 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 PRRT3Q5FWE3 981 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 KRT77Q7Z794 578 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 DEFB132Q7Z7B7 95 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 JAZF1Q86VZ6 243 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 STEAP2Q8NFT2 490 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 RAB40AQ8WXH6 277 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 NR4A3Q92570 626 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MIB2Q96AX9 1013 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 CNRIP1Q96F85 164 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 ARL5BQ96KC2 179 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MRPS30Q9NP92 439 aaKnown RBP10.74□□□□□ -0.69
HDAC4-210ENST00000493582 MTFP1Q9UDX5 166 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 FAM96BQ9Y3D0 163 aa10.74□□□□□ -0.69
HDAC4-210ENST00000493582 OR1F1O43749 312 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 PRICKLE3O43900 615 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 CTNSO60931 367 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 GLSO94925 669 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 EOMESO95936 686 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR4E1P0C645 316 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 S100PP25815 95 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 SSR2P43308 183 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 MLC1Q15049 377 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ACER2Q5QJU3 275 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C3orf33Q6P1S2 294 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 UNQ9370/PRO34162Q6UXP9 181 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 GDPD4Q6W3E5 623 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ETV3LQ6ZN32 361 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C17orf64Q86WR6 236 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 CMTM8Q8IZV2 173 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 GTPBP8Q8N3Z3 284 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR5AR1Q8NGP9 310 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 TIFAQ96CG3 184 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF559Q9BR84 538 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 PAPOLGQ9BWT3 736 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 USP36Q9P275 1121 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms