RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 NIPAL3Q6P499 406 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 CREB3L2Q70SY1 520 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 TUBA1AQ71U36 451 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 TEX29Q8N6K0 151 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 VPS37AQ8NEZ2 397 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 ZG16BQ96DA0 208 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 ZIM3Q96PE6 472 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 TRNT1Q96Q11 434 aaKnown RBP9.52□□□□□ -0.89
SND1-215ENST00000492772 LINC00470Q9BZP3 86 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 NELFAQ9H3P2 528 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 SEC61A2Q9H9S3 476 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 ADPRHL2Q9NX46 363 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 MARCOQ9UEW3 520 aaPredicted RBP9.52□□□□□ -0.89
SND1-215ENST00000492772 RASD1Q9Y272 281 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 SPEF1Q9Y4P9 236 aa9.52□□□□□ -0.89
SND1-215ENST00000492772 A0A096LPE4 126 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 A0A096LPI6 279 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 IGHV2OR16-5A0A0B4J2B6 119 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 PRSS51A0A1B0GVH4 220 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 TRIM77I1YAP6 450 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 HMGN4O00479 90 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 FRS3O43559 492 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 TFP02787 698 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 SHBGP04278 402 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 MSMBP08118 114 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 CBR1P16152 277 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 EGR1P18146 543 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 RPS4Y1P22090 263 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 ARR3P36575 388 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 ANXA11P50995 505 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 HILS1P60008 231 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 ROR2Q01974 943 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 SNTB2Q13425 540 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 DPY19L1Q2PZI1 675 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 MRPL2Q5T653 305 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 PRAMEF8Q5VWM4 474 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 PRAMEF7Q5VXH5 474 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 REP15Q6BDI9 236 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 ZCCHC23Q6ZST2 131 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 USP43Q70EL4 1123 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 LINGO2Q7L985 606 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 ANKRD46Q86W74 232 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 CDK20Q8IZL9 346 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 ZCCHC24Q8N2G6 241 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 IL17RDQ8NFM7 739 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 EPS8L3Q8TE67 593 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 FAM216AQ8WUB2 273 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 GCDHQ92947 438 aaPredicted RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 TMEM186Q96B77 213 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 SLC35A5Q9BS91 424 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 MECRQ9BV79 373 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 RBM4Q9BWF3 364 aaKnown RBP9.51□□□□□ -0.89
SND1-215ENST00000492772 SLC38A1Q9H2H9 487 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 HIF1ANQ9NWT6 349 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 RCE1Q9Y256 329 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 CMAHPQ9Y471 501 aa9.51□□□□□ -0.89
SND1-215ENST00000492772 TMEM129A0AVI4 362 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 SH3PXD2BA1X283 911 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 PRAMEF27A3QJZ7 478 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 A8MVM7 634 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 RPL36A-HNRNPH2H7BZ11 118 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 M0R233 179 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 SYNGR3O43761 229 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 UPK3AO75631 287 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 CPSF4O95639 269 aaKnown RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 DBIP07108 87 aaKnown RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 CHRM4P08173 479 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 IGFBP1P08833 259 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 CELA3BP08861 270 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 ADRA2AP08913 450 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 SAGP10523 405 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 IL7RP16871 459 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 GPR6P46095 362 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 LIMS1P48059 325 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 EVX1P49640 407 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 P2RY4P51582 365 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 COPZ1P61923 177 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 NPRL3Q12980 569 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 DAG1Q14118 895 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 SLC9B1Q4ZJI4 515 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 LRRC74BQ6ZQY2 392 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 MYPOPQ86VE0 399 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 EPHX4Q8IUS5 362 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 CCDC36Q8IYA8 594 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 ANKFN1Q8N957 763 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 OR51F2Q8NH61 342 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 CLDND2Q8NHS1 167 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 UBLCP1Q8WVY7 318 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 TESCQ96BS2 214 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 DPY30Q9C005 99 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 TPK1Q9H3S4 243 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 MTHFD2LQ9H903 347 aaPredicted RBP9.5□□□□□ -0.89
SND1-215ENST00000492772 NOX3Q9HBY0 568 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 ZDHHC2Q9UIJ5 367 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms