RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SHISA6Q6ZSJ9 500 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SPATC1Q76KD6 591 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 MARCH3Q86UD3 253 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 LAX1Q8IWV1 398 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 OR4Q3Q8NH05 313 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 DUSP19Q8WTR2 217 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLC41A2Q96JW4 573 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 OR2B2Q9GZK3 357 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 B4GALT7Q9UBV7 327 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SIGLEC7Q9Y286 467 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 PTRH2Q9Y3E5 179 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 A0A1W2PQ09 198 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RAB40ALP0C0E4 278 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF43P17038 809 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 EIF1P41567 113 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 CDC20Q12834 499 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 EXT1Q16394 746 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 UBE2NLQ5JXB2 153 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 OR13C3Q8NGS6 347 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RAB40AQ8WXH6 277 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ST8SIA1Q92185 356 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RAB33BQ9H082 229 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 FAM60AQ9NP50 221 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 FAM171A2A8MVW0 826 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF208O43345 1280 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLC16A7O60669 478 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLC2A10O95528 541 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 F13BP05160 661 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 POU3F3P20264 500 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 FGF9P31371 208 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SUMO3P55854 103 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SGCBQ16585 318 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 C1orf140Q5VVS0 124 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 PAQR6Q6TCH4 344 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLC22A18ASQ8N1D0 253 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ZG16BQ96DA0 208 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 THAP7Q9BT49 309 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ERVMER34-1Q9H9K5 563 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 MRPS18AQ9NVS2 196 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLC39A1Q9NY26 324 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 NCDNQ9UBB6 729 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 IGHV5-51A0A0C4DH38 117 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 OR6C70A6NIJ9 312 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 BOLA2-SMG1P6H3BVE0 249 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 MAP2K6P52564 334 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CSNK2A1P68400 391 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 ODF4Q2M2E3 257 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM244Q5VVB8 128 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 AGAP6Q5VW22 663 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 RAET1LQ5VY80 246 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 SFXN4Q6P4A7 337 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 KIRREL2Q6UWL6 708 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 KIF18BQ86Y91 864 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM99Q8N816 258 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TM9SF4Q92544 642 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TSLPQ969D9 159 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 FOXRED1Q96CU9 486 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 DMRTB1Q96MA1 342 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 AGAP4Q96P64 663 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 SCGB3A2Q96PL1 93 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 NUBP2Q9Y5Y2 271 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 GOLGA4Q13439 2230 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 A6NCN8 305 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 DCNP07585 359 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CT62P0C5K7 136 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 HIST1H1CP16403 213 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 PSMB10P40306 273 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 MAN2A2P49641 1150 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 DUSP2Q05923 314 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 LRFN4Q6PJG9 635 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 PRSS42Q7Z5A4 293 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 LSMEM1Q8N8F7 131 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 SIMC1Q8NDZ2 872 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 OR1N1Q8NGS0 311 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 STT3BQ8TCJ2 826 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 PDCD10Q9BUL8 212 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 B3GNT4Q9C0J1 378 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 WWTR1Q9GZV5 400 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 UCKL1Q9NWZ5 548 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CACNG2Q9Y698 323 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 DSPPQ9NZW4 1301 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 COL4A6Q14031 1691 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 HMX3A6NHT5 357 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 SPI1P17947 270 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 GABRB1P18505 474 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 RPL27P61353 136 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 FUT7Q11130 342 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 Q499Y3 187 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 WDR74Q6RFH5 385 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF283Q8N7M2 679 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 STK35Q8TDR2 534 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TNFAIP8L1Q8WVP5 186 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 VSTM2LQ96N03 204 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 NXF5Q9H1B4 397 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 PPIEQ9UNP9 301 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms