RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NCALDP61601 193 aa27.55■■■□□ 2
LDB1-204ENST00000490751 SELPLGQ14242 412 aa27.55■■■□□ 2
LDB1-204ENST00000490751 TMEM108Q6UXF1 575 aa27.55■■■□□ 2
LDB1-204ENST00000490751 CREB3L2Q70SY1 520 aa27.55■■■□□ 2
LDB1-204ENST00000490751 PTOV1Q86YD1 416 aa27.55■■■□□ 2
LDB1-204ENST00000490751 ARMC8Q8IUR7 673 aa27.55■■■□□ 2
LDB1-204ENST00000490751 CIARTQ8N365 385 aaPredicted RBP27.55■■■□□ 2
LDB1-204ENST00000490751 POMGNT2Q8NAT1 580 aa27.55■■■□□ 2
LDB1-204ENST00000490751 C1orf162Q8NEQ5 155 aaPredicted RBP27.55■■■□□ 2
LDB1-204ENST00000490751 TSPEARQ8WU66 669 aa27.55■■■□□ 2
LDB1-204ENST00000490751 COX4I2Q96KJ9 171 aa27.55■■■□□ 2
LDB1-204ENST00000490751 TESQ9UGI8 421 aaKnown RBP27.55■■■□□ 2
LDB1-204ENST00000490751 SLC13A4Q9UKG4 626 aa27.55■■■□□ 2
LDB1-204ENST00000490751 MAGED1Q9Y5V3 778 aaPredicted RBP27.55■■■□□ 2
LDB1-204ENST00000490751 TRIM64A6NGJ6 449 aa27.54■■■□□ 2
LDB1-204ENST00000490751 TRIM64BA6NI03 449 aa27.54■■■□□ 2
LDB1-204ENST00000490751 MPGP29372 298 aa27.54■■■□□ 2
LDB1-204ENST00000490751 TGFBR3Q03167 851 aa27.54■■■□□ 2
LDB1-204ENST00000490751 NFYCQ13952 458 aa27.54■■■□□ 2
LDB1-204ENST00000490751 CYP51A1Q16850 503 aa27.54■■■□□ 2
LDB1-204ENST00000490751 ALG10BQ5I7T1 473 aa27.54■■■□□ 2
LDB1-204ENST00000490751 METTL21CQ5VZV1 264 aa27.54■■■□□ 2
LDB1-204ENST00000490751 KLHL17Q6TDP4 642 aa27.54■■■□□ 2
LDB1-204ENST00000490751 PIAS4Q8N2W9 510 aaPredicted RBP27.54■■■□□ 2
LDB1-204ENST00000490751 C11orf65Q8NCR3 313 aa27.54■■■□□ 2
LDB1-204ENST00000490751 BHLHE22Q8NFJ8 381 aaPredicted RBP27.54■■■□□ 2
LDB1-204ENST00000490751 DNAJA4Q8WW22 397 aaPredicted RBP27.54■■■□□ 2
LDB1-204ENST00000490751 BDH2Q9BUT1 245 aa27.54■■■□□ 2
LDB1-204ENST00000490751 TMEM120AQ9BXJ8 343 aa27.54■■■□□ 2
LDB1-204ENST00000490751 CISD1Q9NZ45 108 aaKnown RBP27.54■■■□□ 2
LDB1-204ENST00000490751 DMTNQ08495 405 aa27.53■■■□□ 2
LDB1-204ENST00000490751 PGGHGQ32M88 737 aa27.53■■■□□ 2
LDB1-204ENST00000490751 EPHX4Q8IUS5 362 aa27.53■■■□□ 2
LDB1-204ENST00000490751 C17orf78Q8N4C9 275 aa27.53■■■□□ 2
LDB1-204ENST00000490751 WDR31Q8NA23 367 aa27.53■■■□□ 2
LDB1-204ENST00000490751 SLC17A5Q9NRA2 495 aa27.53■■■□□ 2
LDB1-204ENST00000490751 M0R1B8 84 aa27.52■■■□□ 2
LDB1-204ENST00000490751 OVOL3O00110 214 aa27.52■■■□□ 2
LDB1-204ENST00000490751 MFN2O95140 757 aa27.52■■■□□ 2
LDB1-204ENST00000490751 PTAFRP25105 342 aa27.52■■■□□ 2
LDB1-204ENST00000490751 SELENOPP49908 381 aa27.52■■■□□ 2
LDB1-204ENST00000490751 PCBP3P57721 371 aaKnown RBP27.52■■■□□ 2
LDB1-204ENST00000490751 RBBP4Q09028 425 aa27.52■■■□□ 2
LDB1-204ENST00000490751 ULK3Q6PHR2 472 aa27.52■■■□□ 2
LDB1-204ENST00000490751 C5orf46Q6UWT4 87 aa27.52■■■□□ 2
LDB1-204ENST00000490751 KDM8Q8N371 416 aa27.52■■■□□ 2
LDB1-204ENST00000490751 SLC38A4Q969I6 547 aa27.52■■■□□ 2
LDB1-204ENST00000490751 GTPBP3Q969Y2 492 aaKnown RBP27.52■■■□□ 2
LDB1-204ENST00000490751 RADILQ96JH8 1075 aa27.52■■■□□ 2
LDB1-204ENST00000490751 WFDC6Q9BQY6 131 aa27.52■■■□□ 2
LDB1-204ENST00000490751 C1QTNF6Q9BXI9 259 aa27.52■■■□□ 2
LDB1-204ENST00000490751 SEC14L4Q9UDX3 406 aa27.52■■■□□ 2
LDB1-204ENST00000490751 MGAT4BQ9UQ53 548 aa27.52■■■□□ 2
LDB1-204ENST00000490751 AMDHD2Q9Y303 409 aa27.52■■■□□ 2
LDB1-204ENST00000490751 IGKV1D-42A0A075B6H8 117 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 KRT33AO76009 404 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 CDH2P19022 906 aaPredicted RBP27.51■■□□□ 1.99
LDB1-204ENST00000490751 CD40P25942 277 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 SLC25A3Q00325 362 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 SPOCK1Q08629 439 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 FAM69AQ5T7M9 428 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 FAM91A1Q658Y4 838 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 NIPAL3Q6P499 406 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 Q71RC1 249 aaPredicted RBP27.51■■□□□ 1.99
LDB1-204ENST00000490751 ABHD12BQ7Z5M8 362 aaPredicted RBP27.51■■□□□ 1.99
LDB1-204ENST00000490751 SMYD1Q8NB12 490 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 RNF217Q8TC41 542 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 TAAR8Q969N4 342 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 SLC47A1Q96FL8 570 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 TMEM27Q9HBJ8 222 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 SELENONQ9NZV5 590 aa27.51■■□□□ 1.99
LDB1-204ENST00000490751 OR2T1O43869 369 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 FZD7O75084 574 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 CDKN1AP38936 164 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 LGALS3BPQ08380 585 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 OR1Q1Q15612 314 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 CLEC9AQ6UXN8 241 aa27.5■■□□□ 1.99
LDB1-204ENST00000490751 ALKBH3Q96Q83 286 aaPredicted RBP27.5■■□□□ 1.99
LDB1-204ENST00000490751 TRAV36DV7A0A075B6V5 113 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 M0R082 166 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 AIM2O14862 343 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 SMAD7O15105 426 aaKnown RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 TPST2O60704 377 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 OPN1SWP03999 348 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 TROVE2P10155 538 aaKnown RBP eCLIP27.49■■□□□ 1.99
LDB1-204ENST00000490751 SLC22A25Q6T423 547 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 NET1Q7Z628 596 aaPredicted RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 RANBP3LQ86VV4 465 aaPredicted RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 ZNF417Q8TAU3 575 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 TRMT61AQ96FX7 289 aaKnown RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 POM121Q96HA1 1249 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 ZNF587Q96SQ5 575 aaPredicted RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 TRAF4Q9BUZ4 470 aaPredicted RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 ALG2Q9H553 416 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 KAT8Q9H7Z6 458 aaKnown RBP27.49■■□□□ 1.99
LDB1-204ENST00000490751 EVA1AQ9H8M9 152 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 FAIMQ9NVQ4 179 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 POU2F3Q9UKI9 436 aa27.49■■□□□ 1.99
LDB1-204ENST00000490751 A0A0B4J2E0 115 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 A0A1B0GX12 115 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms