RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 TNFRSF1BP20333 461 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GSTM3P21266 225 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 AQP1P29972 269 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 PBLDP30039 288 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR1E1P30953 314 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ACSL1P33121 698 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CHI3L1P36222 383 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ATP5C1P36542 298 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MNDAP41218 407 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC1A3P43003 542 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CAPZA2P47755 286 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR1E2P47887 323 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 AVPR1BP47901 424 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 INPP1P49441 399 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MMP15P51511 669 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ARFIP1P53367 373 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC16A1P53985 500 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CDH4P55283 916 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 DCDC1P59894 354 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HBA1P69905 142 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CXADRP78310 365 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MXD1Q05195 221 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CRYZQ08257 329 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ACSM2AQ08AH3 577 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 PMS2P11Q13670 270 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 IL18Q14116 193 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GNA13Q14344 377 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NFE2L1Q14494 772 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GINS1Q14691 196 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RAB30Q15771 203 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ST3GAL2Q16842 350 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MICBQ29980 383 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF284Q2VY69 593 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HFEQ30201 348 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 FAM69AQ5T7M9 428 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 AADACL4Q5VUY2 407 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OLFML2AQ68BL7 652 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ACSM2BQ68CK6 577 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF57Q68EA5 555 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HIST2H2AA3Q6FI13 130 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 FAM71E1Q6IPT2 247 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 REEP3Q6NUK4 255 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 JMJD6Q6NYC1 403 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC27A4Q6P1M0 643 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 PLBD1Q6P4A8 553 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 C22orf39Q6P5X5 142 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TSSK4Q6SA08 328 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 C3P1Q6ZMU1 363 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MBOAT1Q6ZNC8 495 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MED25Q71SY5 747 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SHFQ7M4L6 423 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 PXKQ7Z7A4 578 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC9B2Q86UD5 537 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MARCH9Q86YJ5 346 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SFTPA2Q8IWL1 248 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GPR65Q8IYL9 337 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 UBE2J2Q8N2K1 259 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 FTMTQ8N4E7 242 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 DEFB123Q8N688 67 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 EID2Q8N6I1 236 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ARL6IP6Q8N6S5 226 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TCEANCQ8N8B7 351 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RNF152Q8N8N0 203 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 BMPERQ8N8U9 685 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MORN4Q8NDC4 146 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 DMBX1Q8NFW5 382 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GPR32P1Q8NGA4 272 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR51Q1Q8NH59 317 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR52J3Q8NH60 311 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR1S1Q8NH92 325 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SPATA3Q8NHX4 192 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CEP76Q8TAP6 659 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NEIL3Q8TAT5 605 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SMIM4Q8WVI0 70 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ASB13Q8WXK3 278 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NR4A3Q92570 626 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CNOT9Q92600 299 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 KAT2AQ92830 837 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TMEM203Q969S6 136 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ARRDC3Q96B67 414 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RGMAQ96B86 450 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MRPL38Q96DV4 380 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NEURL3Q96EH8 262 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CMTM3Q96MX0 182 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR4K3Q96R72 315 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 LYSMD1Q96S90 227 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ABHD1Q96SE0 405 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 COPS8Q99627 209 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TIMP4Q99727 224 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NPAS1Q99742 590 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC35A5Q9BS91 424 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RSPO3Q9BXY4 272 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms