RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SLC35F1Q5T1Q4 408 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 ZNF773Q6PK81 442 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 GALNTL5Q7Z4T8 443 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 ZNF540Q8NDQ6 660 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 OR14L1PQ8NHC6 308 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 IPCEF1Q8WWN9 437 aaPredicted RBP19.51■□□□□ 0.71
SMC4-221ENST00000489573 SCMH1Q96GD3 660 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 OR2B2Q9GZK3 357 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 DUSP21Q9H596 190 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 NRIP3Q9NQ35 241 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 PAK1IP1Q9NWT1 392 aaPredicted RBP19.51■□□□□ 0.71
SMC4-221ENST00000489573 MRPL39Q9NYK5 338 aaKnown RBP19.51■□□□□ 0.71
SMC4-221ENST00000489573 SLC6A5Q9Y345 797 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 IER3IP1Q9Y5U9 82 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 LIPT2A6NK58 231 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 RIIAD1A6NNX1 92 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 KLRC4-KLRK1H3BQV0 150 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 M0R082 166 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 FZD7O75084 574 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 CLPTM1O96005 669 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 IMPDH2P12268 514 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 NOS3P29474 1203 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 SLC35A2P78381 396 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 MYBPHQ13203 477 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 PMS2P3Q13401 168 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 CCDC81Q6ZN84 652 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 FAM83FQ8NEG4 500 aaPredicted RBP19.5■□□□□ 0.71
SMC4-221ENST00000489573 ZNF417Q8TAU3 575 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 SGCDQ92629 289 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 ZNF582Q96NG8 517 aaPredicted RBP19.5■□□□□ 0.71
SMC4-221ENST00000489573 ZNF587Q96SQ5 575 aaPredicted RBP19.5■□□□□ 0.71
SMC4-221ENST00000489573 KATNB1Q9BVA0 655 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 FN3KQ9H479 309 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 CCDC86Q9H6F5 360 aaKnown RBP19.5■□□□□ 0.71
SMC4-221ENST00000489573 AMBNQ9NP70 447 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 CCNB1IP1Q9NPC3 277 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 ALKBH4Q9NXW9 302 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 PSORS1C1Q9UIG5 152 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 HDGFL3Q9Y3E1 203 aa19.5■□□□□ 0.71
SMC4-221ENST00000489573 TRIM64CA6NLI5 447 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 ARPC3O15145 178 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 IFNGP01579 166 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 CD14P08571 375 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 SHC1P29353 583 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 MEOX1P50221 254 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 TMEM176BQ3YBM2 270 aaPredicted RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 ZNF766Q5HY98 468 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 BCDIN3DQ7Z5W3 292 aaKnown RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 YRDCQ86U90 279 aaKnown RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 SPACA3Q8IXA5 215 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 SCAIQ8N9R8 606 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 RHNO1Q9BSD3 238 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 TTTY12Q9BZ98 90 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 ZNF703Q9H7S9 590 aaPredicted RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 TAS2R5Q9NYW4 299 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 SEC14L4Q9UDX3 406 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 ADAM18Q9Y3Q7 739 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 CLCA1A8K7I4 914 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 KDM4EB2RXH2 506 aaPredicted RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 IDH3BO43837 385 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 TRAPPC6AO75865 159 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 APEHP13798 732 aaKnown RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 SFTPDP35247 375 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 TNFSF10P50591 281 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 B3GALT5-AS1P59052 145 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 CTXN1P60606 82 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 ERVK-25P63136 954 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 AHSA2Q719I0 299 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 TMEM178AQ8NBL3 297 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 ANKK1Q8NFD2 765 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 SLC39A7Q92504 469 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 OR5B2Q96R09 309 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 HINT3Q9NQE9 182 aaKnown RBP19.49■□□□□ 0.71
SMC4-221ENST00000489573 KLHL21Q9UJP4 597 aa19.49■□□□□ 0.71
SMC4-221ENST00000489573 SNTNA6NMZ2 147 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 PLPP3O14495 311 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 PRODHO43272 600 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 OR6A2O95222 327 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 OPN1LWP04000 364 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 F13BP05160 661 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 HTR1AP08908 422 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 ADORA3P0DMS8 318 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 ZNF3P17036 446 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 RAC1P63000 192 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 PLGLB1Q02325 96 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 CXXC5Q7LFL8 322 aaKnown RBP19.48■□□□□ 0.71
SMC4-221ENST00000489573 GGHQ92820 318 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 SFXN2Q96NB2 322 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 SMAD5Q99717 465 aaKnown RBP19.48■□□□□ 0.71
SMC4-221ENST00000489573 COPS4Q9BT78 406 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 CHST11Q9NPF2 352 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 BATF3Q9NR55 127 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 FKBP14Q9NWM8 211 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 CNOT2Q9NZN8 540 aaKnown RBP19.48■□□□□ 0.71
SMC4-221ENST00000489573 ERVK-18Q9QC07 812 aa19.48■□□□□ 0.71
SMC4-221ENST00000489573 RPL36Q9Y3U8 105 aaKnown RBP19.48■□□□□ 0.71
SMC4-221ENST00000489573 A0A1W2PNR3 127 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 EFCAB10A6NFE3 127 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 GJE1A6NN92 205 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 IMPA2O14732 288 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms