RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C6orf226Q5I0X4 101 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ARMC12Q5T9G4 340 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 OR2A2Q6IF42 318 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 FAM199XQ6PEV8 388 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 CCDC137Q6PK04 289 aaKnown RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 METAP1DQ6UB28 335 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 H2BFWTQ7Z2G1 175 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PAQR7Q86WK9 346 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 CDR2LQ86X02 465 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 EGFL6Q8IUX8 553 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 CCDC65Q8IXS2 484 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ARIH2OSQ8N7S6 290 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ATP6V0D2Q8N8Y2 350 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 SUMF2Q8NBJ7 301 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 OR2AP1Q8NGE2 309 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 OR4D9Q8NGE8 314 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 HTR3CQ8WXA8 447 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 IFT74Q96LB3 600 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 SLC38A2Q96QD8 506 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 CLCC1Q96S66 551 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 AZI2Q9H6S1 392 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 NHEJ1Q9H9Q4 299 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 RAB20Q9NX57 234 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 SLC2A8Q9NY64 477 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 BFARQ9NZS9 450 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 RABL2AQ9UBK7 228 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 WARS2Q9UGM6 360 aaKnown RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 PHF11Q9UIL8 331 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 IFT52Q9Y366 437 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 WSB1Q9Y6I7 421 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 CDH10Q9Y6N8 788 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PLEKHG1Q9ULL1 1385 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 IGLV3-16A0A075B6K0 115 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CCDC182A6NF36 153 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TCP11X1B4DZS4 312 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TRDCB7Z8K6 153 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ANKRD63C9JTQ0 380 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 RGS16O15492 202 aaPredicted RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 OR10H3O60404 316 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 HCN1O60741 890 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 PFKFB2O60825 505 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 BBOX1O75936 387 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ATP5LO75964 103 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 GNA14O95837 355 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 LALBAP00709 142 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 LGALS2P05162 132 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 NCK1P16333 377 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 COX5AP20674 150 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 HMGB2P26583 209 aaKnown RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 ANXA13P27216 316 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 HOXD10P28358 340 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CCR1P32246 355 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 EPHX2P34913 555 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 MAP3K8P41279 467 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 GYG1P46976 350 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 DUSP3P51452 185 aaPredicted RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 CRYBB1P53674 252 aaPredicted RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 HSPA2P54652 639 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 APOC4P55056 127 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TIMM10P62072 90 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CHRNB3Q05901 458 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ASPHQ12797 758 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 KLRB1Q12918 225 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CUL1Q13616 776 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 C1orf220Q5T0J3 134 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ZNF691Q5VV52 312 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ATL3Q6DD88 541 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ECHDC2Q86YB7 292 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TTC5Q8N0Z6 440 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TMEM252Q8N6L7 170 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 OR1L4Q8NGR5 311 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 MAGEE2Q8TD90 523 aaPredicted RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 UBE2E3Q969T4 207 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CXorf40BQ96DE9 158 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TIMD4Q96H15 378 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CELF6Q96J87 481 aaKnown RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 MS4A14Q96JA4 679 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CYP2S1Q96SQ9 504 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 MBOAT4Q96T53 435 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 MCHR1Q99705 422 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ZNF670Q9BS34 389 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 GPR61Q9BZJ8 451 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 FAM192AQ9GZU8 254 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 YY1AP1Q9H869 796 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 PATZ1Q9HBE1 687 aaKnown RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 POPDC2Q9HBU9 364 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 MMP26Q9NRE1 261 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 ZNF639Q9UID6 485 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 IKZF2Q9UKS7 526 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 TMCO1Q9UM00 188 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 PLLPQ9Y342 182 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CAB39Q9Y376 341 aaPredicted RBP2.17□□□□□ -2.06
RFC4-213ENST00000489028 TMED5Q9Y3A6 229 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 N6AMT1Q9Y5N5 214 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 CACNG2Q9Y698 323 aa2.17□□□□□ -2.06
RFC4-213ENST00000489028 NSD2O96028 1365 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 A0A075B6Q4 140 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 PPIAL4EA0A075B759 164 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 IQANK1A0A1B0GTG1 560 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms